Silurus meridionalis (southern catfish): 124386925
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Entry
124386925 CDS
T08004
Symbol
rin1b
Name
(RefSeq) ras and Rab interactor 2
KO
K17638
Ras and Rab interactor 1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124386925 (rin1b)
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
124386925 (rin1b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
Motif
Other DBs
NCBI-GeneID:
124386925
NCBI-ProteinID:
XP_046706922
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Position
6:complement(23203838..23230209)
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AA seq
727 aa
AA seq
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MDDILQRSLSVLDRLLLTHSIWLQLSINPDSALCILQREIVGTFLVCKCVVTQRKVLCVR
VQESNVCVAQYPVREEDSTFSLESSALSFPDLCRLVAFYCISRDVLPFPLELPEAIAQAT
NHTQLESISHLGLEFWSSQATPGPPNGPPALSVSWSSRPRSPCFINPLFLQPSQPSREAS
HKRHRLKRSLRVRVSTESSFCLTTGDSEWNQGETDTLRSNERMARRAGGLSMLRRTAALA
PTSEEEDEQMLGVVPPTSVPQPEKSDLNDIPQDEGLCLALERRHAPSLAELDSNSSFSSL
EEEESQPDSALQWPPLTRGTRFPVANPASTLRRMSAAFVCVFAPERRVARLVDELSRERR
SAFGSLVQDFLLKQKEEFKVPSWSSAVELLQGLRKFLSQAKSLLLEAGELEPPIETLVPE
NEKELALEKALFGCVLKPLKVHLSQMLLTLHTQDGTLQRFTNSLQAYQEGTLQLLGVRVA
VLNSPGLERAKKKLNLMQRSHSPIDKVLLLLQVCKSVYKAMGAQSEQEFSSEDFLPALSY
VVVQCNIPQLLLETEYMMELLESSWLSGEGGYYLTSIYASLCLIQSQPGTPCSGGLTNEA
REYLREWSKRRSQEAKLHKESQQNQRFVRIIFQNTECCAAHTLHWKAGESVEVLTRTCAE
VFAINEPQHYCLFWRNGGEMHPVPLHTQPHELGVPTLSYLRKDHDFSKMRRLTRGGAVDL
EESACEE
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggatgacattcttcagaggagtctgagtgttttggatcgcctcctcctcacacactcc
atctggctccagctgtcaatcaaccctgactctgccctctgcatcctgcagcgagagatc
gttgggacttttctggtgtgcaagtgtgtggtcactcagaggaaagtgctgtgtgtgagg
gttcaggagagcaatgtgtgtgttgcacaatacccagttcgagaggaagactccacattc
tctctggagagctcagctctaagttttcctgatttgtgcagattagtggccttttactgc
attagcagggatgtgttgcctttcccactcgagcttcctgaagctatcgcacaggccacc
aatcacacacagctagagagcatctcacaccttggtttggagttctggagttctcaggcc
acccctggcccccctaacggccctcctgccctgtctgtgagctggtcctcccggccacga
tcgccatgtttcatcaaccccctcttcctacagccttcccagccaagtcgagaggcttca
cacaaacgccacaggttgaaacgcagcctgcgagtccgcgtgtccactgaatcctcgttc
tgcctgaccactggagactctgagtggaaccagggcgagacagatacactgaggagcaat
gagaggatggcacggagggcagggggcctaagcatgcttagaagaaccgctgctctggca
cctacctcagaagaagaggatgagcagatgctgggagtggtgcccccaacatcagtccca
cagccggagaaatctgatcttaatgacataccacaagatgaagggctctgtttggcactg
gaacgccgtcatgctccttccctcgccgaactagacagcaacagctccttcagcagcttg
gaggaagaggagtcgcagccagactcagccctgcagtggcctcctcttacacggggcacc
cgtttccctgtcgccaaccctgcctccaccctccgccgcatgagtgctgcattcgtgtgt
gtatttgctcctgagcggcgtgtagctcggctggttgatgagctgtctcgggaaaggcgc
tctgcttttggatccttggtccaggatttcttactaaagcaaaaggaagaatttaaggtg
ccaagttggagctcggctgtggagctgcttcagggattaagaaagttcctttcccaggcc
aagagtctgcttctggaggctggagaactggaacctcccatagagaccctagtgcctgag
aatgagaaagagctggctttggagaaggctttgtttggttgtgtgctgaaaccactaaaa
gttcatctgagccaaatgctgctcacactacacacgcaggacggcactctccagagattc
acaaacagcctgcaggcctatcaggaggggacgctacagctcctgggtgtaagggtggca
gtcctgaactctccaggtctggaaagagcaaagaaaaagctcaatctgatgcagagaagc
cactcaccaatagacaaagtgctgcttttgctacaggtgtgcaagagtgtttacaaggcc
atgggagcacaatctgaacaggaattcagctcagaggatttcctgcctgctctgtcctat
gtggtggttcaatgtaatattccacaactgctgctggagacggagtacatgatggagctg
ctggagtcttcttggctgtcaggagaaggagggtactacttgacgagcatctatgccagt
ctgtgcctaatccagagccagcctggtaccccatgttctggcggtttaaccaatgaggct
cgagagtatttgagagaatggagcaaaagaagatcccaagaagccaaactccataaagag
agccagcagaatcagaggtttgtgcgtattattttccagaacaccgagtgttgtgcagca
catactctccactggaaagcaggcgagagcgtggaagtgttaacccgaacctgcgccgag
gtgtttgccataaacgagccacaacattattgtctgttctggaggaatggaggggagatg
catcctgttcctctacacacacagcctcatgagctgggtgtccccaccctatcctacctc
cgcaaagatcacgacttcagcaagatgcgcaggctgaccagaggtggcgctgtcgatctt
gaggagtctgcatgtgaggaataa
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