Silurus meridionalis (southern catfish): 124386962
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Entry
124386962 CDS
T08004
Symbol
arhgef11
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 11
KO
K12331
Rho guanine nucleotide exchange factor 11
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
124386962 (arhgef11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124386962 (arhgef11)
Membrane trafficking [BR:
smeo04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
124386962 (arhgef11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
RGS
PDZ_2
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
124386962
NCBI-ProteinID:
XP_046706999
LinkDB
All DBs
Position
6:complement(24817129..24859401)
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AA seq
1435 aa
AA seq
DB search
MSVRPPTSTLDSPFAAWLSSLTLGDSKSSLGQQRDSLASEYSSDGAAAGLVHRCVVVQKD
NLGFGFTVCGERIKLVQNVRPGGAAVKAGVQEGDRIIKVNGSFVSSMSHQEVVKMIKSGT
YVALTLQGPPPSVAAVPLQPLLSDLPTNHRTQTGDETTPPPPPPPLPASVIGTPSQRITG
PKPLQDPEVQKHATQILRKMLEQEEAELQDLLEEQSRNPSSSLEERIESAKRRAHQVRVK
MQKDLDGTRSETASTYVTAGEGRLSMDAGDGDYETCESPFSSPSSSFRIPQHRRHGSGTL
DSAGKTQIIGPEEEDDDYDGYMTNDMDGPFQDFELLKARPAHMTVFMRYIFSQLQDPNPL
LFYLSVEAYLGSSPKDARAIAPQICSHFLDPDAALKIKVRDEYMNDIESRLHAQEDIRGP
LSELQQLVLPEIQNQLQDYRNKQLMGLGSLFGESDLQQLDGDSVKERQVVDRQVTALWEL
LSKHEEERSTPLASVITLYLRHAGIKLRDSKVFPGLSTEKEKWLAFFPKTKRQLSSTKRE
KDGEDRKRNPILKYIGKPRSTSQSTFHVPLSPTEVRAGNVRNIIQQFENHTDGEEGENGD
QRLSTGSLGDESMDSPTVSVRLARSESLKAQGEGRRRGGGSGAESVPRSRSDVDMEDCDE
REGPGLRLLHHSASSSASSSSARSLENPTPPYTPRSRRRSVDTPVVLLPDAPPLEEDVVD
SQNWQETVDPHTLLSLSSREIDRQAVIYELFTTEASHLRILRVLDQVFFQKMRNLLTTEE
LACIFPNLPEVYELHASLCESMKKLRESPIVQGIGDLMLARFEDAAGEEFLEQVSQLCSQ
QSQALELIKNKQRKDPRFAHLILECEASPHCRRLQLKDLLVSETQRLTKYPLLLDNIIKH
TEAGSPDLQPLLRAQACCRGILQAVNEVVRETEHRQLLSQYQRRLDLSPLERQTNPAAAP
FKNLDLTTKRMIHEGPLTWKVSKDKAIEVQALLLSDLLVLLQRGPDDRLILRCPSRSLGG
VGXTDHKTPFCPVVRLNSSLVRSNATDNKALYVVSTSETQMYELVAGTSSERNTWKDLLE
KTIASASEGASLTKQGSPAQSCVRRLHDSHVNQDGLLAEETSSVEKESQSDDESALASNT
PTNQSEAFLHQEAHNNLEPRPELSDAALQDVETLRQLIFRDLEDGWSQDSDDTPTNETAN
ERSPFTDRPGSEGSVGSIIESPNPTILQDQVDAPPLELEQSTVQVKRKAVGVVSSSIPDD
IPDVTSIQSSESKGNVFYLVMPKDQMGALTEESSTDDPNYPSPSEAHEAVSLFPQQNHEL
QETPHRSHPEAPSNNTGLSQSRAVTQRHVIKNTDEIFQTMDELMKKLHRLREIEADHYRL
VKKEQKKSLVRMNSGDVLDSSASVIRMPSMDRESGDGKEGDAAEAAQPVLQSTGF
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttcggcctccaacctcgactctggacagtccgttcgctgcttggttgagcagc
ctgacgctgggggactcgaagtcttctcttggccagcagagagactctttggcttcggag
tactcctctgacggtgcagctgcaggcctggtgcatagatgcgtggtcgtacagaaggac
aatctgggcttcggcttcaccgtgtgtggagaacgaataaaactggtgcagaatgtccgt
ccaggtggagcagcggtaaaggccggagtgcaggaaggagaccggatcattaaggtcaac
ggctccttcgtgtcttccatgtctcatcaggaagtcgtgaagatgatcaaatctggaacg
tacgtggcgctgacgctccagggcccaccgccttcagtagccgctgtccctcttcagccc
cttctatcagacctcccaaccaatcacaggacgcagacaggggatgaaaccacgcctcca
cctccacctccacctctgccagcttcagtaataggcacaccgtcgcagagaatcacaggc
cccaaaccactacaggacccagaagtccagaaacacgccacgcagatcctgcgaaagatg
ctggagcaggaagaggcagaactacaggacctgctggaggaacagtcacgcaacccgtcg
tcttctctggaagagagaatagaaagcgcgaagcggcgcgctcatcaagtgcgagtgaaa
atgcagaaagacctggacggaacgcgctcggaaacagcaagcacctacgtgaccgccgga
gaaggtcgattgtccatggatgcgggtgatggggactatgaaacatgcgagagtcctttc
tcctctccgtcctcctcattcaggattccccaacaccgcagacacggctctggcacactt
gactcagcggggaaaacacaaataatcggtcctgaggaagaagacgacgactatgacggc
tacatgacaaatgacatggacggcccgtttcaagacttcgagctgctgaaggcacgaccg
gctcacatgaccgtttttatgagatacatattcagtcagctgcaggacccaaacccactg
ctgttctatctctctgttgaggcctaccttgggtcgagccctaaagacgcccgtgccatc
gcgccccagatctgttctcacttcctggaccccgatgctgctctgaagattaaagtcaga
gacgagtatatgaacgatatagagagtcgccttcatgctcaggaggacatcagaggaccg
ctctccgagctccagcagctggtgcttccagagatccaaaaccagttacaggattacagg
aataagcagctcatggggctgggctccttgttcggggagagcgatcttcagcagctggac
ggggactctgtgaaagagagacaggtggtggacagacaggtcacggcgctgtgggaacta
ctctccaagcacgaagaggagagaagcaccccgttagcttcagtgatcactctgtacctg
cgacacgccgggatcaaactgcgggattccaaggttttcccaggactcagcacggagaag
gaaaagtggctcgcgttcttccccaagaccaagaggcaattgagcagcacaaagcgagag
aaagatggagaagacagaaagaggaacccgatcttgaagtacatcggcaaacccagaagc
acatcacaatcaacgttccatgtcccgttatcccctacagaagtgcgtgcaggtaacgtg
cggaacatcatacagcagttcgagaaccatacagacggtgaggagggggagaacggagac
cagagactgtccactggcagcctcggggacgagagtatggacagtcctaccgtgtctgtg
cgtttggctcgcagcgagtccttgaaggcccagggtgaggggcgtcgtcgtggaggtgga
tcgggggcggagtcggttccccgttctcgaagcgacgttgacatggaagactgcgacgaa
agggaaggaccaggacttcgcctgttacatcacagcgcttcttcctcggcgtccagcagc
tcagcgaggtcactcgagaatcccacaccgccttacactcctcggtccaggcgcaggagt
gtggacacgccggtggtgttattaccggatgcgcctcctctggaagaggatgtcgtcgac
tcgcaaaactggcaggagactgttgatccgcataccctcctctccctcagctcgcgggag
atcgaccgtcaggccgtcatatacgagttattcacgacggaggcatctcatctgcggata
ctcagggttctggatcaggtgttcttccagaaaatgagaaaccttctgacgaccgaggag
ctcgcctgcatcttcccaaacctgcctgaggtctacgagctgcatgcgagtctctgtgaa
tccatgaagaagctgagggaatctcctatagtccaaggcatcggggacctcatgctcgct
agatttgaagatgccgcaggagaggaatttctggagcaggtgtcccaactgtgcagtcag
cagagtcaggcgctggagctcatcaagaacaaacagcgcaaagaccctcgcttcgctcac
cttatcctggagtgcgaggcgagtcctcactgccgccggctccagctcaaggacctgctg
gtgtccgagacgcagagactcaccaagtaccccctcttgctagataacatcatcaaacac
acagaagccggttctccagacctgcagccgctgctgagggcgcaggcgtgttgccgtggg
atcctgcaggccgtcaacgaggtcgtccgggagacggagcaccggcagctgctcagccag
taccagcgcaggcttgatttgtctcctctggagagacagaccaaccctgctgcagcacca
ttcaagaatctggacttgaccacgaagaggatgattcatgaaggtcctcttacatggaaa
gtcagtaaagacaaagctatagaggtgcaagcgcttctcctctcagacctgctggtgctc
ctccagagaggtccagatgaccgcttgatcctccgatgtccgtcgcgctcgctgggcgga
gtcgganacacggaccataaaacgccattttgccccgtagtccggctcaactcgtccctc
gtcaggtcgaacgccacagataacaaagccctttacgtagtgagcacgtctgagactcag
atgtacgagctggtagccggaacgtcctcagagagaaacacctggaaggacctgttggaa
aagacaatcgcatcggcttctgaaggtgcttcgctcactaaacaaggatcacccgctcaa
tcctgtgttcgacggttacacgacagtcatgtcaatcaagacggtttgcttgcggaagag
acgagttcggtggagaaagagtcacagagcgatgatgaaagtgctctcgcttccaacacc
ccaaccaaccagtcagaagccttcctccatcaagaagcccacaataacctggaacctcgg
cccgaactttcagacgctgctcttcaggacgtcgagaccctcagacaattaatcttcaga
gaccttgaagatgggtggagccaagattccgatgacacgcctacaaacgaaaccgccaac
gaaagaagcccgttcacagatcgccccggatcagaggggtctgtgggtagcattattgaa
agccccaatccaacgattcttcaagatcaggtcgatgctccgcccctggagttggagcaa
tcgactgttcaggtcaagaggaaagctgtgggtgtggtctcttcttctattcctgatgac
atccctgatgtcacctccatccaatcttctgaatcaaaagggaacgtgttctacctggtg
atgcccaaagaccagatgggagctctgacggaagagagcagcacagacgacccgaattat
ccgagtccttcagaagcacatgaagccgtatcactattcccacagcaaaaccatgaactg
caggaaaccccacaccggtcacatccagaggcgccgagtaacaacacggggctcagccaa
tcacgggccgtcacgcagcgacatgtgataaagaacacggacgagattttccagacgatg
gacgagttgatgaagaaactgcaccggctcagggagatcgaagccgaccattacagactc
gtcaagaaagaacagaagaaatctctcgtcaggatgaattcaggggacgtcttagactcc
tccgcttctgtcatcaggatgccgtctatggacagagagtcaggagatgggaaagaagga
gatgccgcagaagccgctcagcctgtgttgcagtccacaggattctga
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