Silurus meridionalis (southern catfish): 124387005
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Entry
124387005 CDS
T08004
Symbol
colgalt2a
Name
(RefSeq) procollagen galactosyltransferase 2
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00310
Lysine degradation
smeo00514
Other types of O-glycan biosynthesis
smeo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
124387005 (colgalt2a)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
124387005 (colgalt2a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
smeo01003
]
124387005 (colgalt2a)
Enzymes [BR:
smeo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
124387005 (colgalt2a)
Glycosyltransferases [BR:
smeo01003
]
O-Glycan biosynthesis
O-linked Gal type
124387005 (colgalt2a)
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GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
124387005
NCBI-ProteinID:
XP_046707046
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Position
6:3644777..3657680
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AA seq
610 aa
AA seq
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METIENTVQAMLLLQLSILLWFGAFRSDFSEALSDLEPIWTESTLLKPKVMITILARNSQ
HSLPFYLGCLERMDYPKDRIAIWAAADHSIDNTTAMLQEWVSRVEGLYHSVRFRTTEHEK
SSYADELGPKHWPDSRFSHVMQLRQAALQSARAQWADYILFADSDNLLTNPKVLSHLIAE
NRTLVAPMLKSRTLYSNFWCGMTAQGYYKRTDSYIPIRNWKRVGCHAVPMIHSTMLLDLR
RHASRALAFYPLHQLYPWMLDDILAFAFSARQAGVQMFVSNSEHYGYLPVPLESKQTLED
EEESFTHTLTEAMIDFTLEPSRYLQTASRNKDRMGFDEIYIINLRRRMDRRERMLRTLDV
LGIEVTVTDAVDGKYLNSSQLQVLGIEMLPSYEDPYSGRVLTKGEIGCFLSHYNIWKQVV
ERRQKQVLVLEDDVRFEANFKRRLNTIMDDVRRLRLMWDLIYIGRKRLQVANPERWVQGI
KNLVHPDYSYWTLGYTLSLQGAKKLLAAEPLGNMLPVDEFLPVMFNKHPKEEYLVYFKQR
DLLAFSVEPLLLFPTHYTGEAGYSSDTETSTIWDNESINTDWDRQGTHKKQNRGDAGPVP
TLNRGSRDEL
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggagaccattgagaacactgtgcaggccatgctgctcctccagctttctattctgctt
tggtttggagcctttaggtccgatttctctgaagcgctctcagatctggaaccaatctgg
accgagtccaccctgctcaaaccgaaggtgatgatcactattctggctcggaattcccaa
cacagccttcctttttatcttggatgcctcgagcggatggactatccaaaggacaggatt
gctatctgggctgcagcagaccacagcattgataacactacggccatgctgcaggagtgg
gtgtccagagtggagggactctaccattctgtacgattccggaccacagagcatgaaaag
agttcctatgctgatgaactcggtcccaaacactggccagactccaggttcagccacgtg
atgcagctgagacaggcggctctccaatcagcccgggctcaatgggctgactacatcttg
tttgcagacagcgataacttgttgacaaacccgaaggtcctgagccacttgatagctgag
aaccgtaccctggtggcgcccatgctgaaatccagaacgctctactctaacttctggtgc
ggtatgactgcacagggatattataagagaaccgattcgtacattccgattcgaaactgg
aaacgagttgggtgccatgccgtgcccatgattcactccaccatgctgctggatttgcgc
cgccatgccagccgtgccctggccttctacccgctacaccaactctacccgtggatgcta
gacgacatcctggcctttgccttttcagcgagacaggcaggagtgcagatgtttgtgtct
aacagtgagcattatgggtatttgcctgtgccactggaatccaagcagaccctggaagac
gaggaggagagcttcacacacaccctcacagaggcgatgatcgatttcaccttggagcct
tcacggtatttgcaaacagcatccagaaacaaagacaggatgggattcgatgagatctac
atcattaatctcaggcgccgaatggaccgtagggagcgtatgttgcgcactttggacgtt
ttgggaattgaagtcacggtgactgatgcggtggacggcaaatatttgaactcatcgcaa
ctccaggttttaggaatagagatgctgcccagctatgaagacccttattctgggcgagtg
ctcactaaaggggagatcggctgctttctcagccattacaacatctggaagcaggtggtg
gaacggaggcagaagcaggtactcgtgctagaggacgatgttcgctttgaagcgaacttc
aagaggcgcctcaacacaatcatggacgatgttcggcggttgcggcttatgtgggacttg
atatacattggccgtaagcggttgcaggtggcgaatccagaacgctgggtgcaagggata
aagaacctggttcaccctgattattcttattggacgctgggatatacactctctcttcag
ggtgcgaagaaacttctggcggctgaacctttgggcaatatgctgccagtcgacgagttc
ctgcctgttatgttcaacaagcacccaaaggaagagtatttggtttactttaaacaaagg
gaccttctagctttctcggtggaacctctcctcctcttcccaacccactacacaggagaa
gcaggctatagcagtgacaccgagacatccaccatctgggacaacgagagcattaacaca
gactgggaccgccagggaacccataaaaagcagaaccgtggtgatgcgggtcctgtacct
actttaaacaggggcagcagggatgaactctaa
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