Silurus meridionalis (southern catfish): 124387006
Help
Entry
124387006 CDS
T08004
Symbol
dcaf8
Name
(RefSeq) DDB1- and CUL4-associated factor 8
KO
K11804
DDB1- and CUL4-associated factor 8
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124387006 (dcaf8)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
124387006 (dcaf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EIPR1
Beta-prop_RIG_2nd
DUF3198
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
124387006
NCBI-ProteinID:
XP_046707047
LinkDB
All DBs
Position
6:4374163..4390134
Genome browser
AA seq
897 aa
AA seq
DB search
MADTQAQSSVPNGTGDDPEPEEGRGSEGDSASPTEDQIRTDSELSPQQEQPAGEEEDEEE
EDTDSMDGSLMYSFVEEGKEQESAGGGRRERAKKDDNRRAGRKRNRPTSRHSSSSDDDED
DDDDEDDDENEGEDEDENEKEEADMEAWLGAELKEMSKPKWHAVPSLRAREIGKNSAQFV
KGVCGSRGLVQRLELQARLERHSGCVNTLHFNPSGTRLASGSDDLQVVIWDWARRRAELE
FESGHKSNVFQAKFLPHSGDSTLAMCARDGQVRIAELSATQRCKNTKRVAQHKGAAHKLA
LEPDSPCCFLSTGEDAVVYCIDLRVERPANKLVVVKEGNKKVGLYTIHVNPANTHHFAVG
GRDQYLRIYDQRKINENENNGVLKKFCPSHLVSSESKMNISCLVYSHDGSELIASYNDED
IYLFDSSHSDGADYRQRYKGHRNNATVKGVNFYGPCSEFIVSGSDCGHIYLWDKHSARVV
QFMEGDRGGVVNCLEPHPHLPGLATSGLDHDVKLWAPTAENPTTLKGLKEVMKKNKRERD
EVSTRHGEQYDTQLLWFLMRHMRNRRPLRTQSRHGEGGDGDTDTESWKDTSAMMMMMKTF
EALASRAPSFSEELPSPRSIPSVQLDSVVSASCLSLEFCWLPCGFLWASSQMAPYRTLNG
VCKSFLKKNKPSNNYGTCNTPYTPYRAGIRDVVHLLLRTLQLIASYNDEDIYLFDSSHSD
GADYRQRYKGHRNNATVKGVNFYGPCSEFIVSGSDHDTFTCGTNTARVVQFMEGDRGGVV
NCLEPHPHLPGLATSGLDHDVKLWAPTAENPTTLKGLKEVMKKNKRERDEVSTRHGEQYD
TQLLWFLMRHMRNRRPLRTQSRHGEGGDGDTDTESWSSPESSDDEDGGPDHVQCMSS
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggcggacactcaagcccagtccagcgttccgaacggtactggtgatgatccggagcca
gaggagggaagagggagtgaaggagactctgcttcacctacagaggatcagatacgaacc
gattcagagttgagcccacagcaggagcagccagctggagaagaggaggacgaggaggaa
gaggacacggacagcatggatggcagccttatgtactcttttgtggaggaggggaaggag
caggagagcgcgggaggcgggcggagggaacgagcgaaaaaagatgacaacaggagagcg
ggccggaagcggaaccgacccacgtcacgccactcctccagctctgacgacgacgaggat
gacgatgacgatgaggacgatgatgaaaacgaaggagaagatgaagacgagaacgaaaag
gaagaagcagacatggaggcgtggcttggggcggagttaaaggaaatgagcaagccgaag
tggcacgcggtgccgtctctgcgggcacgggagatcgggaagaactcggcgcagtttgtg
aagggcgtgtgcggctctcggggcctggtgcagcgtttggagctgcaggctcggctggag
cggcacagcggctgcgtcaacacactccactttaacccgtccgggacgcgcctcgcctcg
ggcagcgacgacctgcaagtcgtcatctgggactgggccagacgccgcgccgagctcgag
tttgaaagcgggcacaagagcaacgtctttcaggcgaagtttctccctcacagcggcgac
tccacgctggccatgtgcgcccgagacggccaggtccggatcgccgagctgtccgccacg
caacgctgcaaaaacacaaaacgcgtggctcagcacaaaggtgctgcacacaagctggcc
ctggagccggattccccctgctgtttcctctccaccggagaagacgccgttgtgtactgc
attgacctgcgcgtcgaacgacccgccaacaaactggtggtggtgaaggaaggcaacaag
aaggtgggtctctacaccatccacgtgaatccggccaacacgcatcacttcgccgtcgga
ggaagagatcagtaccttaggatctacgatcagaggaagatcaacgaaaacgagaacaat
ggcgtactcaagaagttctgcccgtctcacctggtgtccagcgaatccaaaatgaacatc
agttgcttagtgtacagccatgacggctcagagctgatcgcgagttataatgacgaggac
atttatctgttcgactcgagtcacagcgacggcgcagattaccgacagagatacaaagga
caccggaacaatgccacagttaaaggcgtgaacttctacgggccgtgcagtgagttcata
gtgagcggcagcgactgcggacacatttacctgtgggacaaacactcggcccgcgtggtg
cagttcatggaaggagaccgaggcggagtggtgaattgtttagagcctcaccctcatctc
ccgggtctggccaccagcggtttagatcacgatgtgaaactctgggctccgactgcggag
aaccccaccaccctgaaaggcctcaaagaggtgatgaaaaagaataagcgcgagcgtgat
gaggtcagcacccggcacggtgaacaatacgatacacagctcctctggttcctgatgaga
cacatgaggaaccgcagacctcttagaactcagagccgacacggagaaggcggagacgga
gacacagacacagagtcctggaaggacacttcagcgatgatgatgatgatgaagacgttt
gaagcgcttgcttctcgagccccttccttctccgaagagctcccgtcaccccgtagcatc
ccgagtgtgcaactcgactccgtcgtctcagcttcctgtctttccctcgagttttgctgg
ctgccctgtggattcctgtgggcttcatcccaaatggctccctacaggacacttaacgga
gtgtgcaagtcgtttctaaagaaaaacaaaccctcgaacaattatgggacgtgtaatact
ccgtacacaccatatagagctggaattcgtgatgtagtgcacttgctacttcgtaccctt
cagctgatcgcgagttataatgacgaggacatttatctgttcgactcgagtcacagcgac
ggcgcagattaccgccagagatacaaaggacaccggaacaatgccacagttaaaggcgtg
aacttctacgggccgtgcagtgagttcatagtgagcggcagcgatcatgacacatttacc
tgtgggacaaacactgcccgcgtggtgcagttcatggaaggagaccgaggcggagtggtg
aattgtttagagcctcaccctcatctcccgggtctggccaccagcggcttagatcacgat
gtgaaactctgggctccgactgcggagaaccccaccaccctgaaaggcctcaaagaggtg
atgaaaaagaataagcgcgagcgtgatgaggtcagcacccggcacggtgaacaatacgat
acacagctcctctggttcctgatgagacacatgaggaaccgcagacctcttagaactcag
agccgacacggagaaggcggagacggagacacagacacagagtcctggagttcgccggaa
tcttctgacgatgaggatggaggccctgaccatgtccagtgcatgtcctcctga
DBGET
integrated database retrieval system
