Silurus meridionalis (southern catfish): 124387079
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Entry
124387079 CDS
T08004
Symbol
myom1b
Name
(RefSeq) M-protein, striated muscle isoform X1
KO
K24495
myomesin
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124387079 (myom1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
124387079 (myom1b)
Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
124387079 (myom1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_2
Ig_DSCAM-DSCAML_C
ig
V-set
Pur_ac_phosph_N
Tissue_fac
Ig_J
Receptor_2B4
Ig_CD22
C2-set_3
Motif
Other DBs
NCBI-GeneID:
124387079
NCBI-ProteinID:
XP_046707132
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All DBs
Position
6:complement(11176788..11210748)
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AA seq
1610 aa
AA seq
DB search
MSGSIPFYQKHHRHYDRAYRSREAQSTVSQYQQSSSTYSAHRKDAKGIRDTTFTSLDETG
VSPQSKRSKPTYLAVDRENQIIGYVVPIFRGSQEFASGLSDTEEARAKQSAGYLARRDLF
TSGVEMERMEHKSHRTVMRESAERISLNKRIHDNEEYHKHLNKDNLMHPPEFVIKPRSHT
VWEKQCVRLHCTITGWPEPRTVWYKNNVTIDPMAHPGKYKIVSSYNVHSLEINKCDFDDT
AQYRVSAMNSKGELSAFASVVVKRFKGEVDESFPAPRLYKKWSGSGVPCLEYGVTFETHI
VEKFGVSFGREGETMSLGCSVVIYPSLQRFQPEIEWYRDDKLLVQSKWVQMHWSGDRATL
TLTHLNKEDEGLYTLRVITKSGYETHSAYVFVQDSDAEVAGAPGAPLDVFCQEANKDYII
VTWKQPAVDGGSSILGYFVDRCEVGTSHWIQCNDTPIKFARFPVTGLVEGRSYIFRVRAV
NKCGMSHPSRVSEPVAAMDPADRARKGTSAPWTGQIIVTEEEPVEGVVPGKPRDLTVIEA
TKNYVVLSWKPPSDKGYEGVMYYVEKCVTGTDSWQRVNTELPVKSPRFALFDLSEGKSYC
FRVRCCNSAGVGEPSDPTEATQVGDKLDIPSAPGRVVPTRNTDTSVVVSWEASREAKELV
GYYIETSVAGSNAWEPCNNKPVKVTRFVCHGLTTGGKYVFRVRAVNAAGISDFSQESEAI
EVKAAIGGGIPHGVFLESGASPAPPYGISVLESVRDSMVLAWKQPTFIGGADITGYFVDY
REVINGVPEKWHEANIKAISERAYRVSDLKENKLYQFQVRAANIAGVGIPSLPSQTFKCE
EWTIAVPGPPHDLQVLEIRKDSLVLLWKPPVYQGRDEVNGFYIDIKEADADFEKWRGVNE
KATNKTYMKIKDLEEGVSYVFRVRAQNKAGVGKASEETEPVLAVTKPGTMELVVDVDDEG
VISLNFECQNLNAESKFIWSKDYVEIKDSKNLTMETKGNKSKTIFNCPSEEDLGIYSCAV
THTDGASASYTLTEEGLKELLKISHDHKFPIIPLKSELAVQLLEKGRVRFWLQAEKISAN
GKVEYVFNDNLISQGEKYKMNFDKNTGIIEMFLESLGKEDEGTYTFQLQDGKATNQSSLV
LIGDVFKQLQKESEFQKKEWHRKQGPHFVEYLSYEVTPECTVRLKCKVGNMKKDSVALWY
KDGREIKASEKLDFSEGVLTLDIAQISKKDAGVYEVIVKDDRGQDKSTLNLTDQGFKDLM
NQVFSVIANSSTPLKIQSTEEGIRLYTFVNYYNEELLVTWQHKDSAIAFSDRIKSGVVGE
QLWLQISEPTEKDKGKYAIEFSDGKGGLKRTIELAGQAYDDAYAEFQRLKAAAIAERNRA
RVAGGLPDVVTIQEGKALNLTCNISGDPVPEVTWLKNEREMVSDGHYVLKFESGKFASFT
ITTVNTSDSGKYSILVKNKYGTESGDFTLEITENMGDQGVVSYLTDEHGKVVTGATVCLS
KPPTPNQSNRTACTPPTLKPASTTPDSPTSTTLSEEKTKKKATDEKKREKKKVMKRKDSV
ILKLPIGEAESHESTPTTTPVTPGTETMPFPDSQPEASADGCELVKEWVK
NT seq
4833 nt
NT seq
+upstream
nt +downstream
nt
atgtctggatcgatcccattctaccagaagcaccaccgtcactatgaccgtgcttaccgt
agtcgggaggcgcagtctacagtcagccaataccagcagagctccagcacttactccgcc
cacagaaaagacgccaaaggcattagagataccaccttcacttctctggatgagacgggg
gtgagtcctcagtcaaagagatccaagcccacctacctggctgtggacagagagaaccag
attataggctatgtggtgcccatcttcaggggaagtcaagagtttgcgagtggtctgtca
gacactgaagaagctcgggctaaacagagtgctggttacctggcccgcagggacctcttc
accagcggggtggagatggaacgcatggagcacaagtctcacagaaccgtcatgagggag
tctgcagaacgcatttccctcaacaagaggatccatgacaacgaggagtatcacaagcac
ctgaacaaggataacctaatgcatccaccggagtttgtgatcaagccccgctcacacact
gtgtgggaaaaacagtgtgtgcggctgcactgcacgattacaggatggcctgagccccgg
actgtgtggtacaagaacaatgttaccattgatccaatggctcatccagggaagtacaaa
atagtgagcagctacaacgtccactctctggagattaacaaatgtgactttgatgacact
gctcagtatcgtgtgtctgccatgaacagcaagggggagctttcggcttttgcctctgtt
gtggtcaaaagattcaagggtgaagttgacgagtcttttccagctcccagactctataaa
aaatggtccggctctggagtgccctgcctggagtatggagtgacttttgagacgcatatt
gtagaaaagtttggtgtgtcttttggacgtgagggtgagacgatgagtctgggctgctcc
gttgtcatctacccatcactgcaacgcttccagcctgagattgaatggtacagggatgat
aagttgctggtgcaatctaagtgggttcagatgcactggagtggagacagagctacactt
acgctcacacatcttaataaagaagacgaggggctttatactcttcgtgtcatcacaaag
tctggttatgagacacactctgcctatgtctttgtccaagatagcgatgcagaggttgca
ggtgctcctggtgctcctctggatgtgttttgtcaagaagctaacaaggattatatcatt
gttacatggaaacagccagctgtggatggaggcagctctattctgggctactttgtcgac
aggtgtgaagtcggcacttctcactggattcagtgcaatgatactccaatcaagtttgcc
cgttttcccgttactggtcttgtcgaaggccgcagctatattttccgcgtgcgtgcagta
aataagtgtggcatgagtcatccttctcgtgtgtctgaacctgtggcagccatggacccc
gctgaccgtgctcgcaaaggaacctctgcaccatggactggccaaatcattgttactgaa
gaagagcctgtagagggtgtggttcccggcaaacctcgtgacctcactgttattgaggcc
accaagaactatgtggtgctaagctggaagcccccaagtgacaagggatacgagggtgtc
atgtactatgttgagaagtgtgtgactggcacggacagctggcaacgtgtgaacacagag
cttccagtaaagtctccacgcttcgctctgtttgacctgtctgaggggaaatcctactgc
ttccgtgtccgctgctgcaactctgctggtgttggtgaaccttcagatcccacagaggcc
actcaagtgggagataaactggatattccgtctgccccaggccgcgtagtgcccacgcgg
aacacagacacatctgttgttgtgtcatgggaagcatcacgggaagctaaagaactggtt
ggctactacattgagaccagtgttgctggaagcaatgcttgggagccctgcaataataag
cctgtcaaagtcaccagatttgtgtgtcatggcttgacgacaggcggaaagtatgttttc
cgtgtgagggcggttaacgcagccggaatcagtgatttctcacaggagtctgaggccatt
gaagttaaagctgctattgggggcgggattccacatggtgtgtttctggagtcaggggcc
tcccctgctccaccctatggaatttccgtgttggagagtgtaagggattctatggtgtta
gcctggaagcagccgacctttattggtggagctgacatcactgggtactttgtggattac
cgtgaggtcatcaatggagtacctgaaaaatggcatgaggctaacattaaggcaatcagt
gaaagagcctacagggtctctgatttaaaggagaacaaactctaccagttccaggttcgt
gctgcaaacatagctggtgttggcatcccatctctgcccagtcagacctttaaatgtgaa
gagtggaccattgctgtgccaggtccaccacatgaccttcaagtgctggaaatacgtaag
gactctttggtgttgctttggaaaccaccagtgtaccagggtcgtgatgaggtcaatgga
ttttacattgacatcaaggaggctgatgcagattttgagaaatggaggggagtcaacgag
aaagcgacaaacaagacgtacatgaagattaaggacctggaagaaggagtgtcgtatgtt
ttccgtgtaagggctcagaacaaagctggtgtgggcaaagcatctgaagaaacagagcca
gtgttggctgtgaccaaaccaggcactatggagttggttgtggatgttgatgatgaaggc
gtgatttcactgaactttgaatgtcaaaatctcaatgctgaatccaagttcatctggtcc
aaggactatgtggagattaaagattctaagaatttgaccatggagactaagggcaataag
tccaaaactatctttaactgcccttctgaggaagacctgggtatctactcttgtgctgtt
acacacactgatggagcctctgccagctacactctgactgaagaaggtctgaaggagttg
ctgaagatcagtcatgaccataaattccccattattccactgaaatcagagttagctgtg
cagttgttagagaagggtagagtccgcttctggctccaagctgagaagatttctgctaac
ggcaaagtagaatatgttttcaatgacaacttgatctctcagggagagaaatacaagatg
aactttgataagaacactggaatcattgagatgtttttggagtcactgggaaaagaggat
gaaggaacgtacacgttccaactccaggatggaaaagccaccaaccagtccagccttgtt
cttattggagatgttttcaaacaactgcagaaagaatcagagttccagaagaaagaatgg
cacaggaaacagggtcctcattttgtggaatacctaagttatgaggtcacacctgagtgc
actgtgagactgaagtgcaaggtgggtaacatgaagaaggactctgttgcattatggtat
aaggatggacgagagataaaggccagtgagaaactggacttctctgaaggagtgctgacg
ctggacattgctcagatctcaaagaaggatgcaggagtgtatgaggtgattgtaaaggat
gacagaggccaagacaaatccacacttaatctgactgaccaaggattcaaggacctgatg
aaccaagttttcagtgtcattgcaaactcttccactccactgaagatccagagcacagag
gagggcatacgtctttacacattcgtcaactattacaatgaagaactgctcgtcacctgg
caacacaaggattctgccattgccttctctgaccgaattaagagcggtgttgtaggggag
cagttgtggctgcagatcagtgaaccaacagagaaagacaagggcaagtatgccattgag
ttctctgatggaaaagggggactaaagaggacaatagagctggctgggcaagcatatgac
gatgcatatgcagaattccagagactgaaagctgctgccattgcagaacgaaatcgggct
cgtgtagcaggaggtctgcctgatgtagtaaccatccaggagggcaaggccctgaatcta
acatgtaatatctcgggagacccggtgcctgaggtgacctggctgaagaacgagagagag
atggtgtctgacggccactacgtactcaagttcgagtctggcaagtttgccagcttcacg
atcaccaccgtgaacacaagtgactcgggaaaatacagcatcttggtgaagaacaagtat
ggcacagagagcggcgacttcaccttggaaatcacagagaacatgggtgatcagggtgtg
gtttcatacctgactgatgaacatggcaaagtggtgactggagccacagtctgtttatca
aaacctccaacaccaaaccaatcaaatcgaaccgcatgtactccaccaactctaaagcct
gcttcgacaacacctgactctccaacatcaactaccctatcagaggagaaaaccaagaaa
aaggcaacagatgaaaaaaaaagggagaaaaagaaagttatgaaaaggaaagactctgtt
attctgaaactccctattggagaggcggagtcacatgagtctacccccacaacgacacct
gttacacctggaacagaaacgatgcctttccctgattcacaacctgaggcatcagcagat
ggatgtgagttagttaaggagtgggtaaaatag
DBGET
integrated database retrieval system
