Silurus meridionalis (southern catfish): 124387084
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Entry
124387084 CDS
T08004
Symbol
cacna1eb
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent R-type calcium channel subunit alpha-1E
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04010
MAPK signaling pathway
smeo04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124387084 (cacna1eb)
04020 Calcium signaling pathway
124387084 (cacna1eb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124387084 (cacna1eb)
Ion channels [BR:
smeo04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
124387084 (cacna1eb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
124387084
NCBI-ProteinID:
XP_046707139
LinkDB
All DBs
Position
6:complement(25388759..25472344)
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AA seq
2183 aa
AA seq
DB search
MVRSGQHAPNGTGSGADSGARTDGPGNEAPKSTKTRRAKPPPPPGSRNCFTANRSLFIFA
ENNPVRKYARRIIEWPPFEYMILTTIIANCVVLALEQHLPGEDKTPMAKKLEKTEPYFIG
IFCFEAAIKLLALGFVFHKGSYLRNGWNVMDFIVVLSGILATAGAHMNIPVDLRTLRAVR
VLRPLKLVSGIPSLQIVLKSIIKAMVPLLQIGLLLFFAILMFAIIGLEFYSGKLHHTCRP
QLYILDNETVDSSEVEFACGVRRCPEKYDCNGSWIGPNDGITQFDNILFAVLTVFQCITM
EGWTAVLYNTNDALGPTWNWIYFIPLIIIGSFFVLNLVLGVLSGEFAKERERVENRRAFM
KLRRQQQVERELNGYRAWIDRAEEVMLAEENKNSGRSALEVLKRATSKKNARRRGEDKYS
EIATVGGQAPKVCGPRPPVNIRTVRRGPAAYLRRKERMLRFSIRRMVKTDSFYWIVLSLV
GLNTICVAIVHHNQPEWLTVLQYYAEFVFLGLFLAEMFLKMYGLGFRLYFHSSFNCFDCG
VIIGSIFEVVWGFFRPGTSFGISVLRALRLLRIFKITRYWASLRNLVVSLMSSMKSIISL
LFLLFLFIVVFALLGMQLFGGRFIFKDYTPANFDTFPAAIMTVFQILTGEDWNEVMYNGI
RSQGGVQYGMWSSIYFIVLTLIGNYTLLNVFLAIAVDNLANAQELTKDEEEEEAFFNQRY
KGREFGLSERRRRPYLYRKRAIHRGRPNPAEAEEETVGPKQGEEQPSSNAFANRRDRRNK
IKMSVWEQRANQLRRRRQMASREVLFDSPIEDPMGTPMSGHHQAHTLVPSAEASPAHLPE
SPMSVVMPLPEPPMSISIPLPEPPESEPVSLMTSGMEDRSSVGVHRSNTDRRHRVARKFR
AAAAAGVVQGGRHRRHRHRESRSENKNTDEEQFQEGGDDAETCQSRQSLLTDDTEMIISH
QPDKEPKRDGVCEVSGRSDVSEGESGIQCTCTALGEEGEAEFCPQHRGENTPEHNYISGE
AIDNENNACYLNQGESIMEAGIMKEMSAQPLLELTPMTVSFKDVEASHMERTSRDEDDDD
DLDEDAPTKAAKPEAPDSMFIFKSKNPIRRICHYVVTLRYFEMTILLVIVASSIALAAED
PVSTNSERNRVLRYFDYVFTGVFTFEMIIKMIDQGLILHDGSYFRDLWNILDFIVVVGAL
IAFALTNVMGNNKGRDIKTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILI
VYKLFMFIFAVIAVQLFKGKFFYCTDGSMGTQRECQGYYIDYGRDRKEVKKREWKRHEFH
YDNVMWALLTLFTVSTGEGWPQVLQHSVDVTEEDHGPSRGNRMEMSIFYVVYFVVFPFXF
VNIFVALIIITFQEQGDKLMEECSLEKNERACIDFAISAKPFTRYMPQNRQTLQYRLWHF
VVSPSFEYTVLVMIALNTVVLMMKYHSAPAAYDMVLKHLNTAFTVLFSMECILKIMAFGF
MNYFRDTWNIFDFITVLGSISEIVVDLQSVNTFNMSFLKLFRAARLIKLLRQGYTIRILL
WTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIQLNDESHINQHNNFKTFFGALMLLF
RSATGESWQEIMLSCLAGQECEPDPSIAPPFISPDHEGGCGTDFAYFYFVSFIFFSSFLM
LNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRIWGEYDRAACGRIHYTAMYEMLTHMSPP
LGLGKKCPAKVAYKRLVLMNMPVDEDMTVHFTSTLMSLIRTALDVKIARGGEDRVQMDTE
LQKEISVIWPHLSQKTLDLLVPVNKDTDMTVGKIYASMMIMDYFKQSKAKKLRRLAEEQL
QLSSPAIPLIAHSAGSALTSGGFVALSPISPQELLMQPVSHDREDNEDDQEPMADEQETD
GLWEEEQPPERLYRPRHKSYKAAVSYSEHQAEKERGRSKEQRHLLSPNASRFNSHERSSK
SCSRSPSEERRHGHTRQGNSSDSPVPSTSESSTPSGRRRLSQTPTHSHPHVSYSPLVCHT
QPSSQAEDEEEERGVAPILGCCSNALWDENVDEEEVQAGDGDEETGHIEEDEYLGTGVRR
FPSEPYLAMQDEEHSPDSSAMETLTFEAAVATSLGRANTVTASMRTRARLGWHVPNGHFR
KRLTQSVSISAGEPLSDTEDDKY
NT seq
6552 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgctccggacagcacgcgccgaacgggacgggctcgggcgcggactcgggcgcg
cgcaccgacggtcccggcaacgaggcacccaagagcacgaaaacgcggcgcgcaaaacct
cctcctcccccgggcagccggaactgtttcaccgccaacaggtcgctgtttatcttcgcc
gagaataatccggtgaggaagtacgcgcggaggatcatcgaatggcctccattcgagtac
atgatcctcactaccattattgccaattgcgtcgttctggctctggagcagcatcttcct
ggagaggacaaaacacccatggccaaaaaactggagaagaccgagccgtattttattggg
atcttttgtttcgaagctgccatcaagctgctcgctttggggtttgtgtttcacaaaggc
tcatacttaaggaatggctggaacgtcatggattttattgtggtgctaagcgggatcttg
gccactgctggagctcacatgaacatcccagtggacctgaggactctgagagcagtgcga
gtcctgagacctctaaaactcgtctcaggaattcccagtttgcagatcgtcctgaagtcc
atcatcaaggccatggttcctctgctgcagatcggcctcctcctgttcttcgccatactg
atgtttgctatcatcggcctggagttctacagcggcaagctgcaccacacctgccgtccc
caactttatatcctcgataacgagacggtggactcctccgaggtagagtttgcatgtgga
gtgcgcaggtgtccagagaaatacgactgtaacggctcgtggatcggcccgaacgacggc
atcactcagttcgacaacatcctctttgcagtgctcactgtgttccagtgtattaccatg
gagggctggactgctgtactttacaacactaatgatgcgttgggtcccacgtggaactgg
atatactttattcccctcatcattattggctccttcttcgtgctaaaccttgtgctcggt
gtcctttcaggtgagttcgctaaagagagggagcgtgtggagaaccggcgagccttcatg
aagcttagacggcagcagcaggtggagagggagctgaacggctaccgggcgtggatagat
cgagcagaggaagtgatgctcgctgaggagaataaaaactcaggaaggtctgcattggag
gtgttgaagcgagccacaagcaagaaaaatgcgaggcgtcgtggagaggacaagtattcg
gaaatcgcaacagttgggggccaagcaccaaaagtgtgtggtcccaggcctccggtaaac
atccgcactgtgcgacggggtcctgctgcctacctgaggcgtaaagagcgcatgctgcgc
ttctccatccgccgcatggtcaagacggacagcttctactggatcgtgctaagccttgtg
ggtctgaacaccatctgcgtggctatcgttcaccacaaccagcccgagtggctcaccgtg
cttcagtactatgcagagtttgtatttctgggacttttcctggctgagatgtttctgaag
atgtatggccttggcttccgtctctacttccactcctccttcaactgcttcgactgtggg
gtgatcatcggcagtatttttgaggtggtttggggtttcttcaggccgggaacgtccttt
gggatcagcgtactcagagctttgagactcttgcgaatctttaaaataaccaggtactgg
gcctctttgaggaacctggtggtgtctttgatgagctccatgaagtccatcatcagcctc
cttttcctgctcttcctgttcattgtggtgttcgctctgctcgggatgcagctgtttggt
ggcaggttcatctttaaagattacactcctgccaacttcgatacgtttccagctgctatc
atgacggtttttcagattctgacgggtgaagactggaacgaggtgatgtataacgggatc
cgctctcagggaggggtacagtacggcatgtggtcgtccatctacttcattgtgctcacg
ctgattggtaattacacactgctgaatgtcttcttggccatcgctgtggataatctcgcc
aatgcccaggagcttacaaaggatgaagaggaggaagaagcgtttttcaaccagcgctac
aagggccgggagtttggcctctctgaacggaggcgcaggccgtatctctacagaaaacga
gccattcacagaggcaggccgaacccagctgaggctgaggaggagacggtggggcctaaa
cagggtgaggagcagccttcttctaatgcctttgccaaccgacgtgacagacgcaacaag
atcaaaatgtctgtgtgggagcaacgtgccaaccagctgcgcaggcggcgtcagatggca
agtcgcgaggttctgtttgacagccctattgaggatcctatgggcacaccaatgagtggc
caccaccaggctcacactcttgtaccttctgctgaagccagtccagcacacctgcccgag
tcgccaatgtcagtcgtcatgcctttacccgaaccacccatgtcgatctcgattccactt
cctgaaccacctgaatctgagccagtgtctctgatgacctctgggatggaggacagatcc
tcagtcggggttcatcgctccaatacagacagaaggcaccgggtggcacgcaagttccgg
gctgctgcagcagcaggtgtcgtgcagggtggccgacaccggagacacaggcaccgcgag
tccaggagcgagaataaaaacacagacgaagagcagtttcaggaaggcggagatgatgca
gagacttgccagtctagacagagcttactgacggatgacactgagatgattatctcccat
caacctgacaaggaaccaaaaagggacggtgtgtgtgaggtttcagggagatctgacgtg
tccgagggagagtctggaattcagtgtacctgcacggcccttggcgaagaaggagaggcc
gagttctgcccgcagcaccggggagaaaatactccagagcataattacatctcaggggaa
gccatcgataatgagaacaatgcctgctatttaaaccagggcgagtcgataatggaagcg
ggcattatgaaggagatgtctgcgcagccacttttagagttaacgccaatgactgtcagt
tttaaggatgtggaagcttctcacatggaaaggaccagtagagacgaggatgatgacgat
gacttggatgaagatgccccaacgaaagccgccaaacccgaagcaccagatagcatgttc
attttcaaaagcaaaaacccgatacggagaatttgccactatgtagtgacactacgctac
ttcgagatgaccattctgcttgtgatcgtggctagcagcatcgctctggctgcagaggac
cctgtgagcaccaactctgagcgcaaccgggtacttcgttacttcgattacgtgttcacg
ggcgtgtttacattcgaaatgatcataaagatgatcgaccagggcctcattcttcatgat
ggctcctatttccgagacttgtggaacatcctagacttcatcgtggtggttggagctctc
attgccttcgctcttacgaatgttatgggaaacaacaaaggtagagacatcaagactatt
aagtctctgcgggttctgagggttctccggcctctcaagaccatcaaaaggctcccgaag
ctgaaggccgtgttcgattgtgtggtgacgtctctgaagaacgtcttcaacatcctcatt
gtctacaagctcttcatgttcatctttgccgtcattgcagttcagctgttcaaagggaag
ttcttctattgtacagacggctccatgggcacacagagagaatgccaaggctactacatc
gattacgggcgggacaggaaggaggtgaagaagcgtgagtggaaaagacacgagttccac
tatgataacgtgatgtgggcgctgctcacgctcttcaccgtgtccacaggagaaggctgg
ccacaggttctccagcactccgtagatgtgaccgaggaggatcacggaccaagccgaggc
aaccgcatggagatgtccattttctacgtggtgtactttgtagtcttccccttcnttttt
gtcaacatcttcgtcgcccttatcatcatcacattccaggagcaaggggacaaattgatg
gaggagtgtagcctggagaaaaatgagagagcctgcattgactttgccatcagcgccaag
ccttttacacgttacatgcctcagaaccgacagacgctccagtaccgactctggcacttt
gttgtctctccctcgtttgagtacacagtcctggtcatgatcgccctcaacactgtggtc
ctcatgatgaagtatcactcggctccggctgcttatgacatggtactgaagcacctgaac
actgccttcactgtgctcttctccatggagtgcatcctcaaaatcatggcctttggcttc
atgaattatttccgtgacacttggaacatctttgacttcatcactgtcctcggcagcatc
tctgagatcgttgtagacttgcagtctgtcaacacgtttaatatgagttttctgaagctg
tttcgtgcagccaggctcattaagctcctcaggcagggatacaccatccgaatcctcctc
tggaccttcgtccagtccttcaaggcattaccgtacgtgtgtctgctcatcgctatgctc
ttcttcatttacgccatcatcggcatgcaggtgtttggaaacattcagctgaacgatgag
agccatataaaccagcacaacaacttcaagacgttttttggcgctttgatgctgctgttc
aggagtgcaaccggagagtcttggcaggagatcatgttgtcttgtttggccggtcaggag
tgtgagcctgacccctccatcgctcctcccttcatctctccagatcacgagggtggctgt
gggacagacttcgcctatttctacttcgtctccttcatcttcttcagttccttcttgatg
ctaaatcttttcgtggctgtgatcatggataattttgagtatctgactcgggattcctca
atcttgggaccgcaccacctggacgagtttgttcggatctggggggagtatgatcgcgca
gcatgtggtcgtattcattacacggccatgtacgagatgttgacccatatgtcaccccct
cttggcctggggaagaagtgtcccgctaaagtcgcctacaagaggctggtactgatgaac
atgcctgtggatgaggacatgacggtccactttacctccacgctgatgtccttgatccgc
actgccctggatgtaaaaattgcccgaggaggagaagaccgagtgcagatggacacggaa
ttgcagaaggagatcagtgtgatctggcctcatctctcccagaagaccttggacctgctg
gtgcccgttaataaagacacagacatgacggtgggcaaaatctacgcctccatgatgatc
atggattactttaaacagagcaaagccaagaagctgagacggctggctgaggagcaacta
cagttgagcagtccagccattcctctcatagctcacagtgcaggctcggctctgaccagc
ggtggttttgtggccctgagtcccatctcacctcaagagcttttaatgcagccagtatct
catgacagggaagacaatgaagatgatcaagaacccatggcggacgagcaggagacggac
ggattatgggaagaggagcagccgcccgagcgtctctatcgaccacggcataagagttac
aaagctgcagtgtcctattcagagcatcaggcagaaaaagagagagggagatcgaaggaa
cagcgccacctgctgtccccaaacgcatctcgcttcaactcgcacgagaggagctcgaag
tcctgctctcgttctcccagtgaggaaagacgacacggacacactcggcagggaaacagc
tccgacagccctgtgccctccacctcggagtcgagcacaccgagcggcaggcgtcgcctc
tctcagacgccgactcactcgcacccgcacgtctcctactctcccttagtgtgccacact
cagccgtcctcccaggctgaagacgaggaggaggaaagaggtgtcgctcccattttgggc
tgctgcagcaatgcgttatgggatgaaaacgtagacgaggaggaagtgcaagcgggcgat
ggagatgaggagacggggcacatcgaagaggacgagtacctgggcacgggagtccgtcga
ttcccttctgaaccctacctcgccatgcaggacgaggagcacagccccgattcctcagcc
atggagactctgacgttcgaggctgctgtggcaacgagtctgggccgcgccaacaccgtc
acggcctccatgcgcacacgggcacgcttaggttggcacgtccctaatgggcacttccgc
aaacgcctgacgcagagcgtctccatctccgccggcgagcctctcagcgacaccgaggac
gacaaatactaa
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