Silurus meridionalis (southern catfish): 124387110
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Entry
124387110 CDS
T08004
Name
(RefSeq) CPD photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smeo03400
]
124387110
Enzymes [BR:
smeo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
124387110
DNA repair and recombination proteins [BR:
smeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
124387110
Prokaryotic type
124387110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
124387110
NCBI-ProteinID:
XP_046707181
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All DBs
Position
6:4704741..4732375
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AA seq
528 aa
AA seq
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MYAGFSVFFRLRRVLEVRRFAVIMSEKKQKNLKRKAEPMKGPEKLSAPRGAEREAGWLQD
TVAEIRNSFECKFNTKRLRFLSEAQKVRQGCGAVLYWMARDQRVQDNWALVYAQELALEE
KLPLHVCFCLVPRYLESTYRQYAFMLRGLQEVAKECTSLNVQFHLLRGEPELTLPEFVKH
WDVGAVVTDFNPLRLPLQWTERVKKQLPSDVPFIQVDAHNVVPCWEASSKLEYAARTIRG
KITKLLPEFLTEFPLVDAHPYTSTKTPKKVDWEEVMSSLVVDRSVGEVQWAEPGTAGGVA
MLESFIEQRLRIFATERNNPNANALSQLSPWIHSGQISAQRALLEVRRWGKRSPESVSSF
TEELLVRRELCDNFCFYNENYDNFSGAYDWAKKTLQDHTKDRRSYVYSQEQLENAETHDP
LWNAAQRQLLLEGKIHGFMRMYWAKKILEWTSSPEEAVNISIYLNDRYSMDGCDPNGYVG
CMWSVCGIHDQGWAERPVFGKVRYMNYAGCKRKFDVAQFEKRYAVKKA
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcgggtttcagtgttttctttcgtctccgccgtgttttagaagtgagaaggttt
gcagtgatcatgtccgagaagaagcagaagaacctgaagcgcaaagcagagccgatgaaa
ggcccggagaagctctcagcgccccggggagcggagagagaagcgggatggctgcaggac
acagtagcggagatccggaactcatttgagtgtaaattcaacacgaagcgacttcggttc
ctgtctgaagcccagaaagtgaggcagggctgcggggcagtgctttactggatggcccgc
gaccagagagtgcaggataactgggcgctggtctacgctcaggagctggctctggaagag
aagctgcctctacacgtgtgtttctgcctcgtgccacgatatttagagtcgacttatcgc
cagtacgccttcatgctcaggggactgcaggaagtggccaaggagtgcacgagtctgaac
gttcagttccacctcctgcgaggcgagcccgagttgaccctacccgagtttgtgaaacac
tgggacgtgggcgcagtggtgaccgattttaaccccctcagacttccgctgcagtggacc
gaacgtgtgaagaagcagcttccgtccgacgtccctttcattcaggtcgacgcccataac
gtggtgccgtgctgggaggcgtcgagtaaactggagtacgccgcgaggaccatcagaggg
aagatcaccaaactcctccccgagttcctgaccgagtttcctctggtggacgcgcacccc
tacacgtccaccaaaacgccaaagaaggttgattgggaggaagtgatgtcatcactggta
gtagaccgcagcgtcggcgaggttcagtgggcggagccggggacagcgggaggcgtggcc
atgctcgagtcgtttatagaacagcggctgcgtattttcgccaccgagaggaacaacccg
aacgccaacgctctcagtcagctttcaccatggatccactcaggtcagatatctgcccag
cgtgcgctgttggaggtgcggcgttgggggaaacgttctcctgaatccgtgtcctccttc
accgaggagctgctggtgcgcagggagctctgtgataacttctgcttctacaacgaaaac
tacgacaacttcagcggtgcgtacgattgggcgaagaagacgctgcaggatcacactaaa
gaccgccggtcgtacgtgtactcacaagagcaactggagaacgcagaaacgcacgaccct
ctgtggaacgctgcacagaggcagctcttgttggaggggaagatacacgggttcatgcgc
atgtactgggcaaagaagatcctagagtggacgtcttcccctgaggaggcggtgaacatc
tccatctacctgaacgaccgctactccatggacggctgtgacccgaacggatacgtgggc
tgcatgtggtctgtgtgtgggattcatgatcagggctgggccgagcgtcctgtttttggg
aaagtgcgctacatgaactacgcaggatgcaagcgtaagtttgatgtggctcagtttgag
aagagatacgccgtgaagaaggcctga
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