KEGG   Silurus meridionalis (southern catfish): 124387144
Entry
124387144         CDS       T08004                                 
Symbol
per1b
Name
(RefSeq) period circadian protein homolog 1b isoform X1
  KO
K21944  period circadian protein 1
Organism
smeo  Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:smeo03400]
    124387144 (per1b)
DNA repair and recombination proteins [BR:smeo03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    124387144 (per1b)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 124387144
NCBI-ProteinID: XP_046707244
LinkDB
Position
6:18111016..18129094
AA seq 1430 aa
MSNDSSDSTPSNVPRMGAGGAEEEEIVVAQTGSPAMSGISPSSDSANGRTGSSSGGESGP
TGLSSDNRGPNSDDMDALSSGNDSGERESEGGLERENGSRGRQSMRSYQSSSSHNGKDSG
MMLETTESNKSSNSQSPSPPSSSLAYSLLSASSEQDPSSTSGCSSEQSARVQTQKELMRA
LKELKIRLPAERKTKGRSSTLNALKYALNCVKQVQANQEYYHQWNVEECHGCSLDLSTFT
IEELDNITSEYTLKNTDTFSMAVSFLSGKVVYISPQGSSLLRSKPEKLQGALFSELLAPQ
DVSTFFSSTAPCRLPPWASCIGSASHAVEYTKEKSMFCRISADGSSSGDMRYYPFRLTPY
LLTLRDSDTADPQPCCLLIAERVHSGYEAPRIPPDKRIFTTSHTPSCLFQEVDERAVPLL
GYLPQDLVGSPVLLCLHPEDRPMMVAIHKKILQFAGQPFEHSPLRMCARNGEYLTIDTSW
SSFVNPWSRKVAFIVGRHKVRTSPLNEDVFTLPRVLEESTVTPDIAQLSEQIHRLLVQPV
HSSSSQGYGSLASNGSHELQPSATSSSESNGTTMEDPAQLHKPMTFQQICKDVHMVKTSG
QQVFIESRNRPPPRKHTTTASLRAVVDTVPDVAPPSKDPILSQLVRKDPPSAYSYQQINC
LDSIIRYLESCNVPNTVKRKCGSSSCTASSTSDDDKQQDTPSNPKGPSVALVSESTPLPA
LTLHSKAESVASVTSQCSFSSTIVHVGDKKPPESDIVMEEAPTTPVPAPPVLHTLPPPPP
PPSPPPLAIAAAPSLAPPPTPPSPAVTPERDGGRRAGGGAGGSGGGRLGLTKEVLSAHTQ
QEEQNFMCRFRDLSQLRVFDPASVLRRHTTTPITRGARCSRDYPAHSSRRRGRGGKRLKH
QETSEQESSLGQSGLTGSLSTGAPAQEGAPNPSFPLAPPTTSSSWPPSVGSQNSLPSVPY
PPGMLPLYPLFSPLSHPITDPSMHTGLRFPIQNPQVGSPMVHPMMALVLPNYMFPQIGTA
LAQPGTATMPQPFYNPNVSFHYPTAGTAPPAPTQTVTAAPQNPSRCSTPQSCSQREGGVE
REGTESPLFQSRCSSPLNLLQLEESPTSRLEAATALAFGERQTTPSTGGQGGGVGGPAVA
NQRSPAEESKENENGEANESNQDAMSSSSDLLDLLLQEDSRSGTGSAASGSGSSGTGSSG
SGLGSSGSGSNGCSSSGSGTRSSHTSKYFGSIDSSENDHSRKQTAGGNGEAQFIKCVLQD
PIWLLMANTDEKIMMTYQLPIRDRDTVLSKDSVALKAMQKHQPRFTEEQKRELSQVHPWI
RTGRLPRAINISGCVGCKSPPSVLPTAPFDVELHEMELCSVLDVTEDGASGEKRMQPDTA
MDEREAEGEPKHQMDEDEEEKRLVRISDQEMTVEEQEEDGKRVHLTNIRR
NT seq 4293 nt   +upstreamnt  +downstreamnt
atgagtaatgacagctcagactccacccccagcaatgttcctagaatgggagctggaggg
gccgaggaggaagaaatagtggttgcacagaccggctcaccggccatgagtggcatttcg
ccatcatccgattcagccaatggcaggacaggatcatcttcaggaggtgagtcaggaccc
acagggttatccagtgataaccgagggccaaattcggatgacatggatgcactatcgagc
ggcaacgactccggagaaagggagagtgaaggaggactggagcgagagaacggctccagg
ggaaggcagtccatgcgaagttaccagagctcctcaagtcataatggcaaagattctggc
atgatgttagagacaactgagagcaacaagagttcaaattcccagagtccgtctcctccc
agcagctcactggcatacagtttgttgagtgcaagctcagagcaggacccttcatccacc
agtggctgcagcagtgagcagtcagctcgtgtgcagacccaaaaagagctgatgagggca
ctgaaggaactcaagattcgtctgcctgcagagaggaaaaccaaaggacgctccagcacc
ctcaacgccctcaaatacgcactaaactgtgttaaacaagtccaggccaatcaggagtat
tatcaccagtggaatgttgaagagtgtcatggatgcagcctggatctttccacatttacc
atagaagagctcgataacattacctcagaatatacgctgaaaaacacagatacattctct
atggccgtgtcattcctgtcggggaaggttgtttacatctcgccgcagggttcgtctttg
ctgcgaagtaaaccggagaagttgcagggggcgctcttttcagagctcctcgcccctcag
gacgtcagcactttcttcagcagcactgccccctgcagattaccaccatgggcatcctgc
atcggatctgcatcccatgctgtagagtacaccaaggagaagtccatgttctgcagaatc
agcgcagatggctcttccagtggagacatgcgatattacccgtttagactgaccccttac
ctgcttacacttcgagactctgacactgcagacccccagccctgctgtctgctcatcgct
gagagagtgcactctggatacgaggctcctcgcattcctccagacaagcgtatctttacc
accagtcacacgcccagctgcctcttccaagaggttgatgagagagctgtgccgctgcta
ggttatctgcctcaggacctggtgggatccccggtgctgctctgtctacacccagaggac
cgaccaatgatggtggccattcacaaaaagattctgcagtttgcagggcagccgtttgaa
cattctccattgcgaatgtgtgctcggaatggggagtatctgacgatagacacctcctgg
tcctcctttgttaacccttggagcaggaaggtggcgtttatcgtgggccgccacaaagtc
agaacctctccactgaacgaggatgtgtttactctgccaagagttctcgaagagagcacc
gtgacaccagatatcgcacaactcagcgagcagatacaccggctcctggttcagcctgta
cacagcagcagctcacagggctacggcagtctggcaagtaacggctcccacgagctgcaa
cccagtgccacttcatcatcagagagcaacggcaccactatggaggacccggctcagctt
cacaaaccgatgaccttccagcagatctgtaaagacgtgcacatggtaaagacaagcggc
caacaagtgtttatcgagtcccgtaaccgtccccctcctagaaaacacactaccacagct
tccttgcgagctgtagtggacactgtgccagatgtggctccaccttcaaaggatccgatc
ctctctcagctggtgaggaaggaccctcccagtgcgtactcttaccagcaaatcaactgc
ctggatagcattatacggtatttggagagctgcaatgtcccaaacacagttaaaaggaag
tgtggctcctcctcctgtactgcatcatctacttctgatgatgataagcagcaggacacc
cccagcaaccctaaaggtccatcagtagctctggttagtgagagtacgccactgccagcc
cttactttacacagtaaggcagaaagtgtagcatcagtaacgtcccagtgcagtttcagc
agtaccattgtccatgtgggagacaagaaacccccagagtcagacattgtaatggaggaa
gcccctacaactcctgtgcctgctcctcctgtccttcatacccttccacctccacctcct
cctccatcacctcctccccttgccattgcagcagctccatctttggcccctcccccaact
ccaccaagccctgctgttacacctgagagagatggaggcaggagagcaggaggaggagca
ggaggaagtggaggaggaaggctgggactgaccaaagaggtgctttctgcacacactcag
caagaagaacagaacttcatgtgtcgctttagggatctgagtcagctaagagtgttcgac
ccagcttcagtacttcggcggcacactaccacaccgatcaccagaggtgcacgatgttca
cgcgattaccccgcacacagtagtcgtcgacgtggtcgaggggggaaaagattgaaacat
caggagacgtcagagcaggaaagctctttaggccagtcaggcctaacaggaagcctctct
acaggtgcccctgcacaagagggagcacctaacccttccttccctctggctccaccaacg
acctcatcatcatggcctccttcagtgggctcccaaaatagtttgccctctgtgccctat
ccaccaggcatgctgcccctttatccacttttctcacctctctctcatcccatcactgac
ccatctatgcatactggccttcgctttcccattcagaatcctcaggtagggtctcccatg
gtccaccccatgatggcgttggtacttcccaactacatgtttcctcaaattggcacagcc
ttggcccagcctggtaccgcaactatgccccaacccttctacaaccccaatgtgtcattt
cactaccccacagccggcactgccccgccagcaccgactcaaacagtaacagcggcccca
caaaacccatcccgctgtagcacacctcagtcctgcagccagagagaaggaggagtagaa
agagaagggacagagtcacccctcttccaatcccgttgctcctcccctctgaatttgctt
cagctggaggagtcaccaaccagtcggcttgaggcagcaactgcattggcgttcggggaa
cggcaaaccacaccttctacaggtggacaaggaggcggggttggtggtccagcagtggcc
aatcagagaagcccagcagaagaatccaaagagaatgaaaatggagaagccaacgaatcc
aatcaggatgccatgtcctcctccagtgatctgcttgacctgctgctgcaggaagactcg
cgatcaggcacaggctcagctgcctcaggctctggatcctcgggtacagggtcctcagga
tctggcttgggttcctcagggtctggctccaatggatgcagcagctctggaagtggaacc
aggagcagccacacgagcaagtacttcggcagcatagactcgtcggagaatgaccactct
cgtaagcagacagctgggggcaacggagaggcgcagttcatcaagtgtgtgctgcaggat
cctatatggctgcttatggccaacacagacgagaagatcatgatgacttatcagctgccc
atcagagacagagacactgtactgagcaaggatagtgttgcattgaaggccatgcagaag
catcagccgcgttttaccgaggagcagaagagggagctgagtcaggttcacccctggatc
cgcacgggacgcctgccacgtgccatcaatatatccggatgtgttggctgcaaatctcct
ccttcagtgcttcccactgccccgtttgacgtggagctccatgaaatggagctgtgcagt
gtgctcgacgtgacagaagatggcgccagcggtgagaaacgcatgcagccagacacagcc
atggatgaaagagaggcagagggagagccaaagcatcagatggatgaagacgaggaagag
aaaagactggtcagaatcagcgatcaggaaatgacagttgaggaacaggaggaggatggg
aaaagagtccatttgactaatataagacgctga

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