Silurus meridionalis (southern catfish): 124387195
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Entry
124387195 CDS
T08004
Symbol
astn1
Name
(RefSeq) astrotactin-1 isoform X1
KO
K24479
astrotactin
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
124387195 (astn1)
Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
124387195 (astn1)
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Gene cluster
GFIT
Motif
Pfam:
ASTN_1_2_N
Annexin_2
ASTN1_2_fn3
FXa_inhibition
fn3
Pur_ac_phosph_N
NDNF
Motif
Other DBs
NCBI-GeneID:
124387195
NCBI-ProteinID:
XP_046707338
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Position
6:complement(6917024..7175740)
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AA seq
1308 aa
AA seq
DB search
MAAHSRALAVLLILGFVAASRALTGDDDPSQDAECKTKSVTVSALPFLRENDLSIMHSPS
ASEPKLLFSVRNDFPGDVAVVDDLENTELPFFVLEISGSSEDIALVRWRQQWLENGTLLF
HIHHQDGNQNAPGVDTTEDPASDTAAEEELRILHISVMGGMIALLLSILCLVLILYTRKR
WCKRRRVPQPQKSASAEAANEIHYIPSVLLGGQARESLRNSRCQGANASGTLSIRETPIL
DGYEYDIGELRQHLQRECMNGGEDFASQVTRTLDSLHGCNDKANVDLTPGNDNTKLSLMS
KYKDNIIATSTVDSNHQQNTLLPHNISTNQRTRLSSNTRAGSAFLNPDGDSGPETDGEPQ
LTFYTDPNRSRRRSRGMRNGNANPAWGSGGSPRSPINKTTLTLISVTSCVIGLVYSSHLS
CGLNVRVVLHVPEHLIADGSRFVLLQGSQLDASDWLNPAQVLLYYQQNASGPWLSELCGR
RLVDPCEHQCDPDSGECQCFDGYMKDPVHKHLCIRNEWGPNQGPWPYTIFQRGFDLVMGE
QPSDRIFRFTYTLGEGMWLPLSKSFVIPPAELAINPSAKCKTDMTVMEDAVDVREELMIS
SSFDSLEVLLDSFGPVRDCSKDNGGCSRNFRCISDRKLDSTGCVCPPGLSPMKDGTGCYD
HHIGIDCSDGFNGGCEQLCLQQLAPLEEDPTLYNIQMFCGCIEDYKRGADGRTCLPLSES
CTEGVDCGETAGIPANQTTFGDVFYGYDNRTKEITTGQILKATFRQKNFARGIEQQLPDG
MVVASVPNEVQCREELSDPVPDPEYLTGMVNYSEVSGYPLVQHWKLRSILYHVRLNQWTL
SQAFSSAIHSLDGATLRSDFVSILKEFGNHFVQEAVYGFEESCTIWYPNKQVQRQLWLEY
QDISKGNSPSDESEERDKEARALTYPAYIASLLDSGAKRLTAGVRMDCSSQGQCPPSCHL
CHMSPGTSRPTEPVLLQVTKAAPIYELVNNNGTYQALQEAMMSMLWCSGKGDVIDDWCRC
DSSAFGSDGLPTCAPLSQPMLKLSHSYEPSSSLVILEWNHAEPPIGVRIVDYLISQEKIT
ERTDHTKVETETMLSFVDDILSGAKSPCVMLGEIPDPLTSISMIIRCLEPDTTYMFRLWA
VDNTGRRSSPSEVTIKTPCPAVDDVKAQEIADKIYNLFNGYTSGKEQQTAYNMLMDLGSP
TLHRVLYHYNQRYESFGEFTWRCEDELGPRKAGLILSQLDDLSGWCRGLLQEPKIGLRRA
SLKFLACRYTDTKAFSLSWMELAQGLHKSCDEQTLPVMYNDYGEPKEI
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcactcgcgtgctctcgccgtcctcctcatcctcggcttcgtcgcggcgtct
cgcgcgctgaccggcgacgacgatccgtcccaggacgccgagtgcaagacgaagagcgtg
accgtgtcggcgctgccgttcctccgcgagaatgacttgagcatcatgcacagcccgtcg
gcctccgagcccaagctgctgttctccgtgcgcaacgacttccccggcgatgtggcggtg
gtggacgacctggaaaacacagagctgcccttcttcgtgctcgagatttccgggagttca
gaggacatagccttggtgcgctggaggcaacagtggctggagaatgggacgctgcttttc
cacatccaccatcaggacggcaatcagaatgctccaggcgtggacactacagaagaccca
gcaagtgacactgcagcagaggaggagctgcgcattctgcacatctctgtaatgggtggg
atgattgctctgctgctttccatcttgtgcttggtgctgatcctgtacacgcggaagcgc
tggtgtaagaggcgtcgggtgcctcagcctcagaagagcgcgagcgccgaggcagctaac
gagattcactacatcccatctgtgctgctgggtgggcaggcacgtgagagcttaaggaac
tcacggtgccagggtgccaatgccagtggcaccctcagtatccgtgagacgcccatcctt
gatggctacgagtacgacatcggtgagctgcgccaacacctgcagcgcgagtgcatgaac
ggcggtgaggacttcgccagccaggtgacgcgcacgctcgattcgcttcacggctgtaat
gacaaggccaacgtggatcttacccctgggaatgacaatacaaaactgtccctgatgagc
aagtacaaggataacatcatagccacgagtaccgttgacagcaatcatcagcaaaacacg
ctcctcccacacaacatctccaccaaccagcgcacgcgtctgtccagcaacacgcgcgcg
ggttcagctttcctgaacccggatggggattctgggcctgagacagatggcgagccacag
ctcaccttctacaccgaccccaaccgcagccgccgccgcagccgaggtatgagaaacggt
aacgccaacccagcgtggggctccgggggctcccctcgcagtcccatcaataagaccact
ctaactctgatcagtgtgacgagttgtgtgatcggcctagtgtactcctctcacctgtca
tgcggcctgaatgtacgtgtggtgcttcacgtacctgagcacctcattgctgacgggtcc
aggtttgtcctgctacagggtagtcagctggatgcctccgactggctcaaccctgctcag
gtgctgctttactatcaacaaaatgccagcggaccgtggcttagtgaactgtgtggtcgt
cgcctcgtcgacccctgtgaacaccagtgtgatcctgactcaggtgaatgccagtgtttt
gacgggtatatgaaagaccccgttcacaagcatctctgcattcgcaatgaatggggcccg
aatcagggtccttggccatacaccattttccagcgcggttttgacttggtgatgggggag
cagccatctgatcgcatcttcaggttcacgtacactctgggagaaggaatgtggctgcca
ctgagcaaaagctttgtcattccaccagctgagctggctatcaacccttctgccaagtgt
aagacagatatgactgtcatggaagacgccgtagacgttagggaggagctgatgatctcc
tcatccttcgacagtctggaagttctgctggattcctttggcccggtgcgagactgctca
aaggacaacggcggctgcagccgtaacttccgctgcatatctgatcgaaagttggactcc
accggttgtgtgtgtcctcctggtctgagcccaatgaaggatggtactggttgctatgac
caccacattggcatcgactgctctgatggatttaatggtggctgtgagcagctgtgtctt
cagcaactagctccccttgaggaagacccaaccctttacaatatccagatgttctgcggc
tgcatcgaggattataagcgtggggcggatggtcgcacatgtcttcccctgtctgaatcc
tgcactgagggagtggactgtggcgagactgcaggcatcccagctaatcaaaccacattt
ggagacgtcttctatggctatgacaaccgcaccaaggagatcaccacaggccagatcctt
aaggctaccttcaggcagaagaactttgcccgtggtatagaacagcagcttccggacggc
atggtggtggcatctgtaccaaatgaggtacagtgccgcgaggagctctctgatccagtt
cctgatcctgagtacctcactgggatggtgaactacagcgaggtttcaggatatcctcta
gtgcagcattggaagctgcggtccattttgtatcatgtcaggctcaaccagtggaccctc
tctcaagcctttagttcagccatccattctctggatggcgctacactgcgcagtgacttc
gtgtccattctgaaggagttcgggaatcactttgtccaggaggcagtgtacggctttgag
gagtcctgcaccatctggtaccccaataagcaggtgcagcgccagctgtggcttgagtat
caggacatcagcaaaggtaattctccctccgatgagtccgaggagcgggataaagaggca
cgcgctctcacttatccagcctatatagccagtctgcttgactcaggggctaagcgttta
acagcaggtgtgcgcatggactgcagcagccagggtcagtgcccaccctcatgccacctg
tgccacatgagccctgggacatcaaggcccacagagcctgtgctactccaagttaccaag
gcggcaccaatctatgagcttgtcaacaacaatggaacctaccaggctctgcaggaagct
atgatgagcatgctgtggtgttctgggaaaggtgatgtcattgatgactggtgtcgctgc
gactccagtgcctttggttctgatggactaccaacttgtgccccactttctcagcccatg
cttaagctgtctcactcctatgaacccagcagctcattggttattctggaatggaatcat
gctgaaccaccaattggtgtgcgcattgttgattacctcatcagtcaggagaaaatcact
gagcggactgaccacacaaaagttgaaacagagaccatgttgagctttgttgatgacata
ctgtcaggagccaaatctccatgtgtgatgctgggtgaaattccagatccactcacttcc
atctccatgatcatacgctgcctggagcctgacaccacctacatgttcagactttgggcc
gtagacaacacaggcaggcgatccagccccagtgaagtcaccatcaaaactccctgtcct
gcagtggacgatgtgaaagcacaagaaatagcagacaaaatttataatctattcaatggc
tacacaagtgggaaggagcagcagacagcctacaacatgttgatggatttgggctcaccc
acactgcaccgcgtcctctaccactacaaccagcgttatgaaagctttggggagttcaca
tggcgctgtgaggatgagcttgggcccaggaaagcaggcctgattctgtcacagcttgat
gacctcagcggctggtgtcgagggcttcttcaagaacccaaaattggcctacgccgagca
tcactcaaattcctggcatgccgttacacagacaccaaggcattcagcctcagctggatg
gagcttgcccaagggctgcacaaatcctgtgatgaacaaacactacctgtgatgtataat
gactatggagaacctaaagaaatctaa
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