KEGG   Silurus meridionalis (southern catfish): 124387225
Entry
124387225         CDS       T08004                                 
Symbol
sf3b2
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 3B subunit 2
  KO
K12829  splicing factor 3B subunit 2
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124387225 (sf3b2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:smeo03041]
    124387225 (sf3b2)
Spliceosome [BR:smeo03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    124387225 (sf3b2)
 Complex B
    124387225 (sf3b2)
 Complex C
   U2 SnRNP specific factors
    124387225 (sf3b2)
SSDB
Motif
Pfam: DUF382 PSP SAP
Other DBs
NCBI-GeneID: 124387225
NCBI-ProteinID: XP_046707399
LinkDB
Position
6:complement(23480063..23495420)
AA seq 867 aa
MAADGVPGTECNPDLNSWSVPELQAKLAEIGAPVMGPREELMDRLKSYMMQTGVMFTKPN
LMGGDDKTMTTIPGLPPMPPMPSMPLPPGMGVLQAMGMMGGPPPPAIRMSMEPPGVSSGM
VQDDSQKMSQRSSQGDSRVIEEQLKEQELLEQQKRAAQLLEHERQQELVKLQQTGPPGTR
APEPGPAPNRLPPIPPLRVAMTTSGPPPPGVSMLSQSSQRQRVPPPPGEDSREVWQSDDM
GIGPKIPQALEKILQLKEIRQEQLIAAPTGEDDDDTADTDMNSSRPYSDDEEESALSKKD
KSRKRRNRKKKKKKNQEKSEQVEGRKSETEKDKKKEPEVEIEYVTEEPEIYDPNYIFFKR
IFEAFKLTDDVKKEKEKEPEKTEKPEITSYKKKFLEEKKDSDDSDEEMKPDVPKXSKKKL
RRMNRLTVAELKQLVARPDVVEMHDVTAHEPKLLVHLKATRNTIPVPRHWCFKRKYLQGK
RGIEKPPFELPEFIKRTGIQEMREALQEKEDAKTMKTKMREKVRPKMGKIDIDYQKLHDA
FFKWQIKPKLTIHGDLYYEGKEFETRLKEKKPGDLSDELRIALGMPTGPNSHKVPPPWLI
AMQRYGPPPSYPNLKIPGLNAPIPENCSFGYHAGGWGKPPVDETGKPLYGDVFGTNAIDF
QAKAEEEEVDRTTWGELEPSDEESSEEEEEEESDEDKPDESGFFTPADSGLITPGGFSSV
PAGMETPELIELRKKKIEEAMDGNETPQLYTVLPERRTGPVGAAMMASTHIYDMSAAGAA
RKAAGVTGLGGDSQGVEVALAPEELELDPMAMTQKYEEHVREQQAQVEKEDFSDMVAEHA
AKQKQKKRKGQPQDTRAGAKKYKEFKF
NT seq 2604 nt   +upstreamnt  +downstreamnt
atggcggctgatggagtcccgggcacggagtgtaacccggacttaaactcatggagcgtc
ccggagctgcaggccaagctggcggagatcggagctccggttatgggccccagagaggag
ttaatggacagactgaagtcctacatgatgcagacgggtgtgatgttcactaaacccaac
ttgatgggtggagatgacaagaccatgaccacgataccaggtctgcctccgatgcccccg
atgccttccatgccgctgcctccgggcatgggcgtgctgcaggcaatgggcatgatggga
ggtccacctccacctgctatacgcatgagcatggagccgccgggtgtctcctccggcatg
gtgcaggacgactcacagaagatgtctcagaggagcagtcagggggattcccgagtgatt
gaggagcagctaaaggaacaggagcttcttgagcagcagaagagagctgcacagctgctg
gagcacgagaggcagcaagagctggttaagctgcagcagacgggaccaccgggaacacgg
gctccagaaccaggacctgcacccaaccggttaccccccattcctccacttcgagtggcc
atgacaaccagtggtccaccacctccaggagtttccatgctatcacagagcagtcagagg
cagagagtaccacctccacctggcgaggactcgagagaggtgtggcagagtgacgacatg
ggaatcgggccgaagattcctcaggctctggagaagatcctgcagctgaaggagatcaga
caggagcagctcatcgctgcccctacaggagaggatgatgatgacacagccgacacggac
atgaacagctctcgtccatattcagatgatgaagaggaaagcgctctctcgaaaaaggat
aaaagccgcaaacgccgaaaccgcaagaagaagaagaagaaaaatcaagagaagagcgag
caagtggaggggagaaagagcgagactgagaaggacaaaaagaaagagcctgaagtggag
atcgagtatgtgactgaggagcctgagatctatgaccccaactacatcttcttcaagagg
atctttgaagcgtttaagttgactgatgacgtgaagaaagagaaggagaaggagccggag
aagacagagaagccggaaatcacctcgtataagaagaaattcttagaggaaaagaaagac
agcgacgacagtgacgaggaaatgaaaccagatgtgccaaaannctccaaaaagaagctg
agaaggatgaacaggctgactgtcgccgagctcaaacagctggtggcgcgtccagacgtg
gtggagatgcacgacgtgacggctcacgagcccaagctgctggtgcacctgaaggccacg
agaaacaccataccagtgcctcgccactggtgcttcaagaggaagtacctgcaggggaag
aggggtatcgagaaaccacccttcgagctgcccgagttcatcaaacgcaccggcatccag
gagatgagagaagctttacaggagaaggaggatgctaaaaccatgaagaccaaaatgcga
gagaaagtccgcccgaaaatgggaaagatcgacatcgactaccagaagctccacgacgcc
tttttcaaatggcagatcaaaccgaagctcaccatccatggagatctgtactacgagggg
aaggagttcgagacccggctgaaagagaagaagcctggagatctgtctgatgagctgagg
atcgctctgggcatgcccactggccccaactcccataaggttcctcctccgtggcttatt
gccatgcagaggtacggtcctcccccctcgtaccccaacctcaagatccccggcctcaac
gcccccattccggagaactgctcgtttggatatcatgctggaggatggggtaaacctccc
gtagacgaaacgggaaaacctctctacggcgacgtgttcggaaccaacgccatcgacttc
caggccaaggcagaggaggaggaagtggaccgtaccacatggggtgaactcgaaccatca
gatgaagagtcttcagaagaagaggaagaggaggagagcgacgaggacaaaccagacgag
tctggtttcttcactccagccgacagcggcttaatcactcccggtggcttctcctccgtt
cctgctggcatggagacgccagaattaattgagctcaggaagaagaagattgaagaggcc
atggacggaaacgaaactcctcagctgtacactgtgctgcccgagaggagaaccggccct
gtgggagcagccatgatggcctccacacacatctacgacatgtccgcggccggagctgct
cggaaggcggccggcgtgaccgggttgggcggagactcccagggcgtggaggtggctctg
gccccggaggagctggagctggacccgatggccatgacgcagaagtacgaggagcatgtg
cgcgagcagcaggctcaggtggagaaggaggacttcagcgacatggtggccgaacacgcc
gccaaacagaagcaaaagaagaggaaaggccagccgcaggacacccgcgccggagccaag
aaatacaaagagttcaagttttaa

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