Silurus meridionalis (southern catfish): 124387258
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Entry
124387258 CDS
T08004
Symbol
ppargc1a
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform X1
KO
K07202
alpha peroxisome proliferator-activated receptor gamma coactivator 1-alpha
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04371
Apelin signaling pathway
smeo04910
Insulin signaling pathway
smeo04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
124387258 (ppargc1a)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
124387258 (ppargc1a)
04920 Adipocytokine signaling pathway
124387258 (ppargc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
smeo03029
]
124387258 (ppargc1a)
Mitochondrial biogenesis [BR:
smeo03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
124387258 (ppargc1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
SR-25
Motif
Other DBs
NCBI-GeneID:
124387258
NCBI-ProteinID:
XP_046707439
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All DBs
Position
6:complement(16320212..16352069)
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AA seq
1160 aa
AA seq
DB search
MAWDRCNQESVWTELECAALVGEDQPLCPDLPELDLSELDVSDLDADSFLGGLKWYSDQS
EIISSQYGNESSNLFEKIDEENEANLLAVLTETLDSIPVDEDGLPSFEALADGDVTNASD
QSCPSTPDGSPRTPEPEEPSLLKKLLLAPPNSQLSYNQYPVTKAQNHAANNHRIRPTPAV
NKTDNPWNSKQRGVCPQPNRLVRRPCTELLKYLTASDDAFQTRPSEAKSTWSGCDKDRGG
PGTASCSSSSSPSSSSTSSFSSLSSCSSSTASKKKPTSASLSTQQQQQQQQLAVQAQRGE
SQAAGAYCVAGEGAGQWQRCTHGEQSTPVVPSCGSGCSHACSSEEGRPLQGADTGSLAAA
RFIRYMHSYSLPPREMGRAGSCGHCLEAGGWTGASRADRHMTITIRKRRQEQEHPMLSQL
LTSKPRPARYRAHLQMPNVSQTDKKDPPKIHPRDKGWDGHKVKDSQEHQVINPNPDFQEP
RQSNSLDLELSTLVDLDLERLLLKFEHDIEESKIKVGQNGVDVHDDVLGSPLSFLGDLPS
PLFQDSLVPEHTPSTIQEQNPHRQADCRHPDDQVPSPLAKPTTLPLPLTPESPNDHRGSP
FENKTIERTLSVEISGTPGLTPPTTPPHKASQENLFKVSLKTKLSLASSALTSKKAKLSN
GSPSSLPVSSSSRKAQEKSELYAQLSKASSALPLGNLEECRGKRPTPRVFGDHDYCQASS
TKRDNGTSAATITGPVEGRHVEPKDSTMPAFSYLTSSLSSTSPLSSSLARQLQDLCPLVQ
EACPDKEAQGKNHSPALGAKTSKECIAAGRKLLRDQEIREELNKHFGNPQQAFFSETEQG
EFQPLDESDSGDENFYSFEAYMDTGLPDFKDLEVGRERLLCSWEGTPLEMLFEGSPPCSP
SSSLPSQSSVSPPSTLLSPRHFYHSESGSRSRSRSRSSSRNRYRSLSRSPYSRSQSPENY
SPSWSYHSVDKSTFKSRTIRSPQSDSRSGLGQRPRYDSYEEYQHEQLKREEYQRDYEKRE
VERSEQREKQRKRAIEERRVLYVGRLRADSTRSELKRRFEVFGEIEECAINLRHNGDNFG
FITYRYTCDAFAALENGHTLRRPNEPQFELCFGGQKQFCKSNYTDLDSHSEDFDLTSTKS
KYDSMDFDSLLREAQCSLRR
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgggacaggtgcaaccaggagtcggtgtggacggaactagagtgtgctgccttg
gttggggaagaccaacccctttgccctgacttacctgaactggatctctccgagctggac
gtcagtgatctggatgcagatagctttctgggtgggctcaagtggtacagcgaccaatca
gaaatcatttccagtcaatatggcaacgagtcatcaaatctgtttgagaagatagatgaa
gaaaatgaggccaacttgctggcagtgctcacagaaaccctggacagtatccctgtggac
gaggacggattgccttcgtttgaagccctggcagatggggacgtgaccaacgccagcgat
cagagctgtccctccacccccgatggctcgccacgcacccctgagccagaggagccctcc
ttgctaaagaaactccttttggctccacctaactctcagctcagctataatcaataccca
gtcactaaggcgcagaaccatgcagccaacaaccacaggatacgaccaacacctgctgtt
aacaagacagacaacccctggaacagcaaacaaagaggggtctgcccccagccaaaccgg
ctggtgagacgcccgtgcactgaattgctcaagtacctcactgccagcgatgatgccttc
cagacaagacccagtgaagccaagagtacctggtcaggctgtgacaaggacaggggcggg
cctggtactgcttcctgctcgtcgtcttcctctccatcttcttcatccacttcctccttc
tcctccttgtcctcctgttcctcctctaccgcctcaaagaagaagcccacctctgcctcc
ctgtcaacacaacagcagcagcagcagcagcagctggcagtgcaggcgcagagaggtgag
agccaggcagctggggcgtattgtgtggctggtgagggggcagggcagtggcagcggtgt
acacatggggagcagtccacccctgttgtgccatcctgtggaagtggctgtagccacgcc
tgctccagtgaagaggggaggccactgcagggtgcggacacaggcagcctggctgccgcc
cgcttcattaggtacatgcactcttactctctcccgcctagagagatgggtcgcgcaggc
agctgtggccattgtcttgaggcgggcggctggactggggccagccgtgctgacagacac
atgacaataactattaggaagaggaggcaagagcaagagcatcctatgctcagccagctg
ctgacctccaaacccagaccagcccgttatcgggcccacctgcaaatgcccaatgtgtcc
cagacagacaagaaagatccacccaaaatacatcctagagacaaagggtgggatgggcat
aaagtgaaagatagtcaggaacatcaggtcataaacccaaatccagactttcaggaacct
agacaatctaattcattagatcttgagctttcaactctggttgacttggacctagaaaga
ttgttattaaaatttgagcatgatatagaagagtctaaaattaaagtggggcaaaatggg
gtggatgttcatgatgatgtcctaggcagtcccctttcatttttaggggacttgccaagt
ccacttttccaagactctttagttccagagcacaccccttccaccatacaagagcagaac
ccacacagacaggcagactgcaggcaccccgatgaccaggttccatcaccgttagccaaa
ccaaccaccttgccacttcctttgaccccagagtctccaaatgaccacaggggatctcca
tttgagaacaagaccattgaacgcacactgagtgtggagatctctggaaccccaggtctg
acaccacctaccacacctcctcataaagccagtcaagagaaccttttcaaagtatcactc
aaaaccaagctgtctttagcttcttcagccctgacgagcaagaaggccaagctgagcaat
ggaagccctagctctcttccagtcagtagctccagcaggaaggcccaggagaagtctgag
ctttatgcccagctgagcaaggcatcctctgccctgcctctgggaaacttagaagagtgc
cggggcaagcggcctacgccccgtgtgtttggcgatcatgattattgccaggcctcaagc
acaaaacgagataacggcacatcagctgccacaatcaccgggcctgtcgaaggccggcat
gtagaacctaaagactcaaccatgccagccttttcttatctcacatcctctttgtcttcc
accagtcccttatcttcctctctggcaaggcagctgcaggatctttgcccattggttcag
gaggcttgtccagacaaggaagctcaggggaagaaccacagtcctgcactgggtgccaaa
acttctaaagagtgcatcgctgctggcaggaagctgctgcgagaccaggagatacgggaa
gagctcaataagcactttggtaacccccagcaagccttttttagtgagactgagcagggt
gagttccagccactagatgaaagtgactctggggatgagaacttttactcttttgaggcc
tacatggacacaggcctgcctgattttaaggacctagaagtgggccgtgagcgtcttctt
tgctcttgggaagggactccactggagatgctctttgaaggttcgccaccctgttcccca
tcaagtagcttgccttcccagagttcggtctcaccaccctcaactctgctctctccacgg
cacttctaccactctgagtccggatcccgctctagatcccgctccaggtcttcctctcgc
aacagatacagatctctctccaggtctccttattcccgttcccagtccccagaaaactac
tccccctcttggtcatatcattctgttgataagagcactttcaaatccaggactatcaga
agtcctcagtcggactctcgctctggtcttggtcagaggcccaggtatgacagctatgaa
gaataccagcatgaacagctgaagagagaggagtaccagcgggactatgagaaacgtgag
gtagagaggtctgaacagagggagaaacaacgaaagagagcaatagaggagaggcgggtt
ttgtacgttggacgtctccgggctgacagcacacgctccgaactcaaacggcgctttgaa
gttttcggcgagatcgaggagtgtgccatcaacttgagacataatggggacaattttggc
tttatcacctaccgctacacttgtgatgccttcgctgcccttgagaatggacacaccttg
cgcaggccgaacgagcctcagttcgagctttgctttggtggacaaaagcagttctgcaaa
tccaattacacagacttggactctcattctgaagactttgatctgacttcaactaaaagc
aaatatgactcgatggatttcgacagcttgttgcgcgaggcccagtgtagcctgaggagg
taa
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