Silurus meridionalis (southern catfish): 124387265
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Entry
124387265 CDS
T08004
Symbol
lrp10
Name
(RefSeq) low-density lipoprotein receptor-related protein 10
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124387265 (lrp10)
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
124387265 (lrp10)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
CUB
Motif
Other DBs
NCBI-GeneID:
124387265
NCBI-ProteinID:
XP_046707453
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Position
6:21917187..21926310
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AA seq
765 aa
AA seq
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MRINMDAPYSLWIFSLLFVTVHCNLELASSSAQCAKSTKILHARQGEIRGSARHGPPGPA
NCSWVITSPVGERVIISFSEFFFRCDSSWLSLTTVTGRPVSLCGYQLPKPMEFYEGNITV
TQHFVSQFHSVSGFLLSYIKDTGPCYPGEFECYSERCLPMSWRCNGQVECLGDADELGSD
EEECDPGEHQPQLDNEPSPIPTEISASSAVNPNMEMGPLSPVEPVLSSSVPGGPCGGYLQ
AFYGSFVPPLLMGEAMECVWTVDPQDSRTLKLELQQLALGHRDVLIITDQPAGGGNVIKN
VTSSSNYKTVEVESPTGLLSLTYRAQEASEGRGFNATYRIADYCLPWEGLCKGSEGGCYT
PKQHCDGHWDCAETGLDEDGCGGCPAGYFPCGTLQKMGHLVGRPSCYSFKDRCNYQLNCA
DGSDERECKVCQPGTFHCDSERCVFESWRCDGQVDCKDGTDEQNCTMTLPRKVITAATVG
SLVCGLLLVIAMGCTCKLYSLRTREYSLFAPISRQEAEFIQQQAPPSYGQLIAQGIIPPV
EDFPTENPNEPTSLSLRGLLQLIRQDNISSPRRRRRPRFVRRAIRRLRRWGLISRPTSRS
TQTTSSNSQQTEAASTDQESRQSGPPGSAVARETTDQPLPQKLRLSQQTEQEQQADAPPS
LSSPTPLSPPVPSVSLPTTPPSLQPADAPEARQTPPVAVAPSSPSLASLFHSLGLSISRF
RHSPSPTALTLSSSPSFSTSSSEDEVLLIPLSDDTTSEDDVPMLT
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgaggatcaacatggatgccccctacagcctgtggatttttagcttattatttgtaaca
gtccactgcaatctggagctggcctccagttcagcacaatgtgccaaatcaacaaaaata
ctacacgcaagacaaggagaaattcgtggttccgcccgccatggccctcccggccctgct
aactgcagctgggtaatcacatcccctgtgggagagcgtgtgattatcagtttctctgag
tttttctttagatgtgactcgagctggctaagcctgacaactgttacaggtcggcccgtg
tcgctttgtggataccagctgcctaagccaatggagttctacgagggaaatattacagtg
actcagcactttgtctcacaattccactcagtttcagggttcctcctgtcctacattaaa
gacactggtccttgttaccctggtgagtttgagtgttacagtgagcgctgtcttcccatg
tcctggcgctgcaatggtcaggttgagtgccttggggacgctgacgagctcggctcagac
gaggaggaatgtgaccctggtgaacatcaacctcagttggacaatgagccgtcaccaatc
ccgactgaaatttcagcaagctcagctgttaaccctaacatggagatgggaccgctgtcg
cctgttgaacctgttctttcctcttcagtccctggtggaccctgtggggggtatctccag
gccttttatggttcttttgtgccccctttgctgatgggggaagcaatggagtgtgtgtgg
acagtagacccacaggactcccggactcttaagttggagcttcagcagttggcacttggc
catagagatgtccttatcatcactgaccagcctgctgggggtggcaatgttattaaaaat
gtcacatcttcatccaattacaaaacagtagaagtggagtcccctactggtctactgtca
ctaacctatcgtgcacaggaggcctcagaggggcggggtttcaatgccacataccgcatt
gctgattactgtctgccctgggaaggtctttgtaagggctcagaggggggctgctacaca
ccaaagcagcactgtgatggtcactgggactgtgcagagacgggactggacgaggatggc
tgtggcggatgcccggctggctactttccctgtgggacactgcagaagatgggccacctt
gtcggccggccttcctgctattcctttaaagacaggtgcaactaccagctgaactgcgct
gatgggagtgacgagagagagtgcaaagtgtgtcagcctggtacatttcattgcgacagt
gagaggtgtgtgttcgagagctggcgctgtgacggacaggtcgattgtaaggatggcact
gatgaacaaaactgcactatgactctgcctcgaaaagtgatcactgcggccaccgtgggc
agcctagtgtgtggtctgctgctggtcattgcaatggggtgcacctgcaaactgtactca
cttcgcactcgagaatacagtttgtttgccccaatcagccgccaggaggcggagtttatc
cagcaacaagcgccaccttcctatggccagctgattgctcagggaattattcctcctgta
gaggattttcctactgaaaaccccaatgagcccacctccctttctctgagaggactgctt
cagcttatcaggcaggacaacatctcctcccctcggcgaagacgccggccacggtttgtc
cgccgagcaatccgccgcttgcgtaggtggggtctaatttccagaccaacctctaggtct
acccagaccacgagctccaactctcaacaaacagaagcagcttcaacagaccaggagtcc
agacagtccgggcctccaggctcagcggtggccagagaaaccactgatcagcctttgcca
caaaaattgaggctgtcccaacaaacagagcaagaacaacaagcagatgcacctccttct
ctttcttcacccactccactttctcctccagtaccttctgtttcacttcccacaactcca
ccttcccttcagccagcagatgccccagaagcacgtcagaccccaccagtcgctgttgcc
cccagcagcccctcccttgcctctctcttccattctctggggctaagtatctctcgtttc
agacattcgccttcccctacggcacttactctctcatcttccccatctttctccacctct
tcctcagaagacgaagtgctactgatcccactttctgatgacacgacctctgaggatgat
gtgcccatgctgacctga
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