Silurus meridionalis (southern catfish): 124387345
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Entry
124387345 CDS
T08004
Symbol
chrnb1
Name
(RefSeq) acetylcholine receptor subunit beta
KO
K04812
nicotinic acetylcholine receptor beta-1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124387345 (chrnb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124387345 (chrnb1)
Ion channels [BR:
smeo04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
124387345 (chrnb1)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
124387345
NCBI-ProteinID:
XP_046707602
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Position
6:20675843..20700531
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AA seq
494 aa
AA seq
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MKAWEWLLLTCCLFSLCKIGETSEAENQLMKKLFSAYNVKVRPAKTVESKVVVRIGMSLS
SFVSLNMKNEEMTTIVIMNLEWNDPRLAWNPKEHSGIDILRISSAKVWLPDIVLINNNDG
VFEVALNVHVQAYSNGRVTWTPPALFRSSCGVKVTYFPFDWQNCTMVFKSFTYDSSEIDL
QHALDETGKEIQEIVYDNSFSESGEWHIRHKPSRKNVKKEDLYEDITFYLIIERKPMYYV
FNIILPCILITIIAIFNFYLPPDAGEKMGLTINVLLTLTVFLLLLADKVPETSLGVPIIV
NYLMFTMVLVTCSVILSVVVLNLHHRSPNTHEMPLLVRKIFIHILPPYLGLLRPKLETPL
SLERPHKKENHKIISRAADEYFIRKPNTSVLFPKPNRYQPDGLCTDLRKFIDGPSHYLTL
PPELKSAVEAICYIAEQLQAAKDYEALKEDWQYVAMVVDRLFLWIFVIFTTVGTLAIFAD
ASFNATPTDPFMSP
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcctgggaatggctcctgcttacctgctgcctgttcagtctgtgcaaaattgga
gaaacctctgaagcagagaatcagctaatgaagaagcttttctccgcttacaatgtcaaa
gtgcgaccagcgaaaacagtagagagcaaagtggttgtaaggattggcatgagcctgtca
tcattcgtcagtctgaacatgaaaaatgaagagatgaccaccattgttatcatgaacctg
gagtggaacgatccccgtttggcctggaatcccaaagaacacagtggcattgacatactg
cgaatttcatcagcaaaagtgtggctcccagacattgtgttgattaacaataatgatggt
gtgtttgaagtggcactaaatgttcatgttcaggcgtacagtaatggcagagtaacatgg
accccgcctgcccttttccgcagctcttgtggtgttaaggtgacatactttccatttgac
tggcagaactgcaccatggtgttcaagtcattcacatacgactcgtctgaaatagatctt
cagcatgcccttgacgagaccggcaaagagatacaagagattgtctatgacaacagtttc
agtgagagtggtgaatggcatatccgtcacaagccttccaggaagaatgtaaagaaagaa
gacctatatgaagacatcaccttctacctgatcatcgaacgcaaacccatgtactatgta
ttcaacatcatcctaccctgcattctcattaccatcatcgccatctttaacttctatctg
cctcctgatgctggagagaagatgggtttaaccatcaacgtgctgctgaccctcactgtc
tttctgctcctgctggctgataaagtccctgagacatctctgggtgtccccatcatcgtc
aactacctgatgttcaccatggtcctggtgacgtgttcggttattctcagtgtggttgtc
ttaaatctgcaccaccgctcaccaaacacccacgaaatgcccctgttagtgcgtaagatt
tttatccacattcttcccccatatctgggtctcttaaggccaaaattggagacacctctc
tctttggagcgcccacacaaaaaggagaaccacaaaatcatcagtcgggcagcagacgaa
tactttattcgcaagcccaacacctctgtgctctttcccaaaccaaacagatatcagcca
gacggcctgtgcactgacctgagaaagttcatcgatggccccagtcactacctgactctg
ccccctgagctgaaatcggctgtggaggctatctgctatatcgctgagcaactacaagct
gcgaaagactatgaagcactaaaggaagactggcagtatgtggccatggtggttgatcga
cttttcctctggatctttgtcatcttcaccactgttggaacattagccatttttgctgac
gctagtttcaatgctactcccaccgaccccttcatgagtccttga
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