Silurus meridionalis (southern catfish): 124387357
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Entry
124387357 CDS
T08004
Symbol
chd1l
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smeo03036
]
124387357 (chd1l)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
124387357 (chd1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
DEAD
LIG3_BRCT
AAA_14
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
124387357
NCBI-ProteinID:
XP_046707632
LinkDB
All DBs
Position
1:32751116..32781496
Genome browser
AA seq
1038 aa
AA seq
DB search
MERFNNMKTSKFSRLVQGVVPEEKESTLSEEDLQECGLTGINLRDHQLKGVRWLVECLNT
SKGCILGDEMGLGKTCQAISLLLYARGHLKTKGPFLVLCPLTVLQNWQDELTKISPSLSV
ICYHGDKQERENLQKEMNEKKFDVLLTHYTLCRNDASVLRRWKWEILVVDEAQEIKNIKS
KLHQILTEFNVNFKLLLTGTPIQNNVQEVYSLLTFIQPHAFPPGAIEDFVNTYKDVQTGS
SQARDLHEVIRPFLLRRVKVAVETNLPKKEQILIHHGMSSLQKSCYKAILMKDLSVIEGD
KGGQNRLLNILMQLRKCVNHPYLFNGVEPEPYEIGEHLVKASGKLSLLDKILAFLSDNGH
RVLLFSQMTRMLDIVQDYLEYRGYSYERVDGSVRREERNLSIRNFKTKDIFILLLSTKAG
GVGLNLTEADTVIFLDNDFNPQNDLQALSRAHRIGQTRPVKVIRLCGRDTVEEIILSRAA
SKLRLTDTVIEEGHFSQMDNASDFELKEILTFGTSSLLATDESFVLDVDLEESLGRSENG
KWLIEEKEGEEENITAAEDEDKNRPHRMYSFEGMDYSKVPSTEDKYWIACRLAEQSAVQE
DTETEGHHLRSKTRALFCESLPSTSRIKRCLTESELEERRRKKEESSAKRARVLEEKKKQ
REDQKYKKKMAWWESCGYKSLCLPSADCESEDEDVDVEDLINRNLTDTDDTEISYVLGDV
THPKAKSEDAIIVHCVDDSGHWGRGGLFTALVSRSDEVKKQYELAGDMEDLELGRVLMFP
IDDKQSRACGTDYLALIVSQKRDKDNNLSGILLSALDEGLKMISRVAKQKKASVHLPRIG
HDTKGFNWYGTERLIRKHLASRGVPTFIYYFKRADSHSSPWSSSSSGSSPIASTSRDASG
LPAPAPVSPGSSGSLDPPGPSGVQPKGSRESSSSSGQGGRAPGLPEFMRGVHVHFYNMEA
TERKKLARHLIAYDGDEEDLMSRMVTHVVAEVENPVHIQDLQEMSQQYPQAILVKKKWLE
SCFANQRKVAVSKFLHRF
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atggagcggtttaacaacatgaagacgtcgaagttttctcgacttgttcagggagtcgta
ccggaggaaaaagagtcgactttgtctgaggaggacctgcaggaatgtggattaacagga
attaatctgagggaccaccagctgaaaggagtacgatggctcgtagagtgtttgaatact
tctaaaggctgcatcctaggggatgaaatgggcctgggtaaaacctgtcaggccatcagc
ttgcttctgtatgctcgaggacatctcaaaactaaagggccctttctggttctctgtcct
ctaacagttctgcaaaactggcaagacgagttgacaaaaatcagtcccagtctgtcagtg
atctgttaccatggcgataaacaagagagagaaaacctgcagaaagaaatgaatgagaaa
aaatttgacgtcctgctgactcactacacgctatgtcggaatgatgcatcagttttaaga
aggtggaaatgggagattttggttgtggatgaggctcaagagataaagaacataaagtca
aagcttcaccagatcctcaccgagttcaatgtgaacttcaagcttttgctaaccggaact
ccgatccagaacaatgtgcaagaggtttactcattgctcaccttcatccagccacatgct
ttcccaccaggtgcaatagaggacttcgtgaatacgtataaagatgtccagaccggtagc
tcacaagctcgggatctccacgaggttatccggcccttcttgctgcgcagggtgaaggtc
gcggtggagacaaacctgccaaagaaagaacagatattgattcatcacgggatgagttct
ctccaaaaatcctgctacaaagccattctgatgaaggatctgagtgtgattgagggcgat
aaaggcggccaaaatcgcctcctaaacattctaatgcagctgaggaagtgcgtgaaccac
ccatacttgttcaacggtgtggagcccgagccgtatgagataggggaacacttggtgaag
gcgagtgggaagctgtctctgctcgacaaaatacttgccttcttatctgataacggtcat
cgagttctgctgttttcccaaatgaccaggatgttggacatcgtgcaggactacctggag
tacagaggttacagttatgaacgtgtcgacggctcggtgcgaagagaagagcgcaatttg
tctatcagaaacttcaaaaccaaagacatcttcatcttactgctcagcaccaaagctggt
ggggttggtttaaacctgacggaagccgacactgtaattttcctagacaacgattttaac
ccccagaacgacctgcaggctttgtctcgagctcaccggatcggccagacgaggccagtg
aaagtgatcaggctgtgtgggagggacacggtggaggagatcatcttatctcgcgctgca
tccaaactccgtctcaccgacactgtgattgaggagggacatttctctcagatggacaac
gctagtgattttgagttaaaggaaatcctgacgtttggaacaagcagtctgctggccaca
gatgagagttttgttttggacgtggacttggaggagagcctgggtcggtccgaaaacggc
aagtggctgattgaagagaaagagggggaagaggagaacatcacagctgctgaggatgaa
gataagaacagaccacatcggatgtattccttcgaggggatggattactccaaagttccg
agcaccgaggacaagtattggattgcatgcaggttggcggagcagtcagctgtccaggaa
gacactgagacagaaggacaccacctgcgcagcaaaaccagagctttattctgtgaaagt
ttacccagtacatcgcgaataaagaggtgtctgactgagtccgagctggaagagaggcgc
cggaagaaggaggaatcgtctgcgaagagagccagagtgctggaagagaagaagaagcag
cgtgaggatcaaaaatacaaaaagaaaatggcctggtgggaatcctgtggctacaaatca
ttgtgcctgccctctgctgattgtgaaagtgaggatgaggatgtggacgtcgaagacctc
atcaataggaacttaacagacacggacgacacggagattagttacgtcctcggcgacgtg
actcatcctaaggctaaaagcgaggacgccatcatcgttcactgtgtggacgattctgga
cactggggacgaggcggcttgttcacagctctggttagtcgatcggatgaagtgaaaaag
cagtacgaactggccggagacatggaagatttggagctcgggagagtgctgatgtttccc
attgacgataagcagtccagagcgtgtgggacagactacctggctctgatcgtctcccag
aagagagacaaagacaacaacctgtcagggattctcctcagcgccctggacgaagggctc
aagatgatctccagagtggccaagcagaagaaagcaagtgtccaccttccacgaatcggc
cacgacaccaaaggcttcaactggtacggcactgagagactgatacgcaagcacttagct
tcccgaggcgttcctaccttcatatactacttcaagcgtgcagactcgcactccagcccc
tggtcttcgtcttcgtctgggagctccccgatcgcgtctacctcacgtgacgcctcagga
ctccctgccccagcacccgtctctcccggctcctcgggttctctcgaccctccaggtccg
tctggagtgcaacccaaaggttctcgagaaagttctagctcatcagggcagggtggaaga
gctccaggtttgcccgagttcatgcgaggggtccacgtgcacttctacaacatggaggcg
acggagagaaagaaactcgcacgccacctcattgcgtatgatggagatgaggaggacctc
atgagccgcatggttactcacgtcgtggcagaggtggaaaatccagttcatatacaggac
ttacaggaaatgagtcagcagtatcctcaggccatcctcgtgaagaagaagtggctcgag
tcgtgtttcgccaaccagagaaaagtcgccgtttccaagtttcttcaccgtttctga
DBGET
integrated database retrieval system
