Silurus meridionalis (southern catfish): 124387413
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Entry
124387413 CDS
T08004
Symbol
pars2
Name
(RefSeq) probable proline--tRNA ligase, mitochondrial
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
124387413 (pars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
smeo01007
]
124387413 (pars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smeo03016
]
124387413 (pars2)
Enzymes [BR:
smeo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
124387413 (pars2)
Amino acid related enzymes [BR:
smeo01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
124387413 (pars2)
Transfer RNA biogenesis [BR:
smeo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
124387413 (pars2)
Prokaryotic type
124387413 (pars2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
HypA
Zn_ribbon_8
DUF5817
Motif
Other DBs
NCBI-GeneID:
124387413
NCBI-ProteinID:
XP_046707718
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All DBs
Position
1:complement(25290353..25294111)
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AA seq
480 aa
AA seq
DB search
MESLMLLCRHKSCALLPRLLSKACRRSHHYHPQASQCSTSFSSKPVPMTPLVSRLFQPSN
LREGQDMGDMTCRSQRLMLQAGLIHSSNPGCFYYLPAALRSMEKLVRLIDEEMQAIGGQK
VDMPTLCGAELWKQSGRWELMGKEMFRLRDRHNAEYCLGPTHEEAVTDLLASQSTLSYRQ
LPLLLYQVTRKFRDEQKPKFGLLRGREFYMKDMYSFDISEEAALHTYHSVCHAYSRLFNR
LGLRWVQVQAATGNIGGTLSHEFHLPADIGEDHLLMCGNCGFSANVETLEPGQTDCPQCQ
TTHLTESKGIELGHTFYLGTKYSKVFNATFVNAQNKPSVTEMGCFGLGVNRILAASIEVL
SSEEFIRWPGLLAPYQVCILPPKKGSKAGEAIHLAEELAHSLGNSLPNLKGEVVLDDRTH
LTIGKRLKDANMLGYPYVVVVGHKAMDEQPVFEVVCQSSGETVFLSKDALMQLLSGVETI
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggagtccctgatgctcctttgtcgccacaaatcatgtgcactgctgcccagattactg
agcaaagcatgcagaaggagtcatcactatcatccacaagcttcacagtgctcaaccagt
ttttcctccaaaccagttcctatgacacctctggtatcacggctttttcaaccttcaaat
ctccgtgaaggacaggatatgggggacatgacctgccgcagccagaggttgatgctgcaa
gcaggtctcattcacagctctaatccaggctgcttctactaccttcctgctgccctgcgc
tccatggagaagctggtgaggctgattgatgaggaaatgcaggctattggtgggcagaaa
gtcgacatgccgactctgtgtggagcggagctttggaagcagagtgggcgctgggagctc
atgggaaaggagatgttcaggctgcgggatcgacacaacgccgaatactgtctcggccca
acacatgaggaggcagtcacagatctgctggcatctcagagcacgttgtcttataggcag
ctgccactgctgctttaccaggttacgcgcaaatttcgtgatgagcagaagccgaagttt
ggattgctccgaggccgagagttctacatgaaagacatgtactcatttgatatcagcgag
gaagctgccctccacacctaccactccgtgtgccatgcctactctcgtctgtttaaccgg
ctcgggttgcggtgggtccaggtgcaggctgccactggcaatatcggggggacgctctca
catgagtttcatctgccagctgatataggagaagatcatctgcttatgtgtgggaattgt
ggcttttctgctaatgttgaaacattagaaccaggccaaactgactgtcctcagtgccag
acaactcatctcactgagtccaaaggcattgaactgggacataccttttatcttggaaca
aaatactccaaagtgtttaatgcaacatttgttaatgctcagaacaagccttcagtgaca
gagatgggctgtttcggtcttggtgttaatcgcatccttgctgcatccattgaggtgctc
tcgtctgaggagtttattcgctggccagggctacttgcaccttatcaagtgtgcattctg
ccccctaaaaagggcagcaaagctggtgaagcaatccacctagcagaagagcttgcccac
agcttaggaaacagtttaccaaatctaaaaggggaggtcgtattggatgacagaacccac
ttgaccattggcaagcgtctaaaagatgctaacatgctgggttacccctatgtggtggtg
gttgggcataaggccatggatgagcagcctgtatttgaggtggtgtgtcagagtagtggg
gagactgtgttcctcagtaaagacgccttgatgcaattattgtctggagtcgagacgatc
taa
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