Silurus meridionalis (southern catfish): 124387472
Help
Entry
124387472 CDS
T08004
Symbol
pls1
Name
(RefSeq) plastin-1
KO
K17275
plastin-1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smeo04812
]
124387472 (pls1)
04147 Exosome [BR:
smeo04147
]
124387472 (pls1)
Cytoskeleton proteins [BR:
smeo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
124387472 (pls1)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of microglial cells
124387472 (pls1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CH
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_8
DUF5580
Motif
Other DBs
NCBI-GeneID:
124387472
NCBI-ProteinID:
XP_046707824
LinkDB
All DBs
Position
6:complement(3947044..3960226)
Genome browser
AA seq
625 aa
AA seq
DB search
MENNVTQMSREDLEDLRQAFNKIDIDKSGYVNDFELQELFREASLSLPGYKVREIAERFI
AGDTNKDEKISFDEFVAIYQDIRSKDIRETFRKTISRKDGICSFGGTSGLSSQGTQHSYS
DEEKVAFVNWINKALANDPDCQHIIPMDPNTDSLFTSVKDGILLCKMVNHSQRDTIDERV
INTKKRTMFNMTENLILALNSASAIGCMVVNIDAQDMIAGTAHLVLGLLWQIIKIGLFAN
IEIASNEALIALLGEGEDLDQLLSLSPEELLLRWVNYHLKAAEWKPIKNFSEDIKDSRAY
FHLLNEIAPRGDEDDQIPIIVDMSGLNEDDDLKRAELMLKQAARMDCRQFVSPQDVVAGN
QKLNIAFVANLFNMYPALKKPADNGIDLTTIEGESREDRTFRNWMNSLGISPRVNHLYSD
LTDGLVILQLYEKIQVPVDWKKVNRPPYPGLAAKMKKLENCNYAIELGKREAKFSLVGIG
GDNINEGNSKHILALVWQIMQRYTLKVLSDIGDGEKINDQVIVNWVNTKLQDGQKQSSIS
NFKDKSISSSLPVIDLIDTIAPGAIREDMVKREADSPEDLLNNAKYAISMARKIGAKVYA
LPEDLVEVNPKMVMTVFACLMGRSK
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggagaacaatgtgacgcagatgtctcgagaagacctggaggacctcaggcaagccttc
aacaaaatcgacatcgacaagagtggttatgttaatgacttcgagctgcaggagctcttt
cgcgaggccagcctctctttgcctgggtacaaggtgcgagaaatcgcagagaggttcatc
gcgggtgacaccaacaaagatgagaagataagcttcgacgagttcgttgcgatataccaa
gatattaggagcaaagacattagagaaacgtttcgcaagaccatctccaggaaggatggg
atctgctcatttggaggaacatctggactctccagtcaaggaacccagcactcatattct
gatgaagagaaagtggcttttgtcaactggatcaataaggccttggcaaacgaccccgac
tgccaacacatcatccccatggacccgaataccgacagtctgttcacatcagtgaaggat
ggaatacttctctgcaagatggtcaaccactcccagcgagacacgatcgacgaaagggtc
atcaacacgaaaaaacgcacaatgttcaacatgaccgaaaatttaatcctggcccttaac
tccgcctcagccattggttgcatggtggtcaacattgacgctcaggacatgatcgctgga
actgctcacctggttctcgggctcctctggcagatcattaagattggcctgttcgcgaac
atcgagatcgcgagcaacgaagctctgatcgcactgctgggtgagggtgaggacttggac
cagctgttgtccctgtcccccgaggagctccttctgcgctgggtaaactatcaccttaaa
gctgctgaatggaaaccgatcaaaaacttctctgaagacatcaaggactccagggcctac
ttccacctgctgaacgagatcgctccaagaggagacgaagacgaccagatacccattatc
gtcgacatgtctggcttaaacgaggacgatgacctgaagagagcggaactcatgttgaaa
caggcggctcgaatggactgccgacagttcgtgtcgccgcaggatgtggtggcggggaat
cagaagctcaacatcgccttcgttgccaacctgttcaacatgtacccggcactgaaaaaa
cccgccgacaacggcatcgacctcaccacgatagagggagaatccagagaggatcgaacc
ttcagaaattggatgaactcactggggattagtccgagagtcaatcacttatacagtgac
ctgacggatggcctggttattctccaactgtacgagaaaatccaagtcccggtggactgg
aagaaagtgaaccgtcctccgtatcctggtcttgctgccaaaatgaaaaaactggagaac
tgtaactacgccatcgagttgggcaaaagggaggcaaagttctcgctggtgggcatcgga
ggggacaatatcaacgagggcaattccaagcacattctggcgctggtgtggcaaataatg
caaaggtacaccctcaaagtgctctcagatattggcgatggagaaaagattaatgaccag
gtcatagtcaactgggtgaacacaaaactgcaagatggacaaaagcaatcgagtatcagt
aactttaaggacaaatcaatcagctccagtctcccagtgatcgatctgattgatacaatc
gcacccggagccattagagaagacatggtgaagagggaagctgacagtccagaggacttg
ctcaacaatgcaaagtacgctatctcaatggcacgcaagattggtgccaaggtgtacgca
ctgcccgaagacctggtggaggtcaaccccaagatggtgatgactgtgttcgcctgtttg
atggggagatcgaagtga
DBGET
integrated database retrieval system
