Silurus meridionalis (southern catfish): 124387498
Help
Entry
124387498 CDS
T08004
Symbol
ttc5
Name
(RefSeq) tetratricopeptide repeat protein 5 isoform X1
KO
K24928
tetratricopeptide repeat protein 5
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124387498 (ttc5)
Membrane trafficking [BR:
smeo04131
]
Autophagy
Other autophagy associated proteins
Others
124387498 (ttc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTC5_OB
TPR_1
TPR_2
TPR_11
TPR_8
TPR_17
TPR_16
TPR-S
TPR_19
TPR_CcmH_CycH
TPR_12
Motif
Other DBs
NCBI-GeneID:
124387498
NCBI-ProteinID:
XP_046707857
LinkDB
All DBs
Position
6:13999529..14006050
Genome browser
AA seq
452 aa
AA seq
DB search
MVSCLKMAEVDNDGEHKTSDKDDLQVLKELVDKLYHFRDHYFETHSVEDASRKQNDVVQE
MNNVLMKLEEKEDLYKNSVQFLLLWGRCLNVAPQFSQAAEENLSRAVKLEPGLVEAWNTL
GEQYWKKGDLTAAKTCFTGALQQSKNKVSLRNLSMVLRQLPPEGGGQEQGKRIMESVDLA
RQAVQLDVTDGTSWYILGNAYISLFFSSGQNPQMSQQALSAYSQAEKIDKASALNADLHF
NRATLFQYEEMFSSALVGYSRAAALDPGWEEATEREKLLLKYLDQITALMENKGKVKARR
LRNMLSSLSITALGPCASPQYRSPTGHTGSLELCTFTALKHGHNTGVAAMGKVVFSLATE
GRMAFTFGMVDSEETCCVVMVYNTADGWGVLIGDTVVIPEPQVKRHSITHNDKSYNFRSI
RVDSPLLLIVNGKRQALQTQTATSVSYKPHSE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggtttcctgtctaaagatggctgaagttgataacgatggtgagcataaaacatctgac
aaagacgatttgcaagtattaaaggaacttgtagacaaactttatcactttagggatcac
tattttgagacacacagtgtggaagatgccagtagaaaacaaaacgatgttgtccaggag
atgaacaatgtgctgatgaagctggaggagaaagaagatctctacaaaaacagtgttcag
tttttgctcctttggggccgatgtctgaacgtagctccacagttcagtcaggcagcagaa
gagaacctctcgagggcagtaaaactggaaccaggcctggtggaggcgtggaatacacta
ggcgagcagtactggaagaaaggtgacctgactgctgcaaagacctgttttactggagca
ctgcagcagagcaaaaataaagtgtctttgagaaacctctctatggtactgaggcagttg
cctccagaagggggcggtcaggagcagggaaagcgtattatggagagtgtggatctggct
agacaggctgtgcagctggatgtcacagatgggacatcttggtacatcctagggaatgcc
tacatctccttgttcttcagcagtggacaaaatcctcagatgtctcagcaagctcttagt
gcttattcacaagctgagaaaattgacaaagcatctgccttaaatgctgatctgcacttc
aatcgcgccacgttgttccagtatgaggaaatgtttagttcagctttggttggatacagt
cgagctgcagctcttgacccaggctgggaggaagctactgaaagagagaagcttttgctg
aaatacctagaccaaataactgctttaatggaaaataagggaaaagtaaaagctcgacgc
ctgcgtaacatgctctcctccctaagcattactgctttgggtccctgtgcctcgcctcag
tatcgctccccgacaggtcacaccggaagcttggagctttgcactttcaccgctcttaaa
cacggacataataccggtgttgcagccatgggaaaggtcgtcttcagtctggcaacagag
ggccgcatggcctttacgtttggtatggtggacagcgaggagacatgttgtgtggtcatg
gtttataacacagctgatggctggggggtgttaatcggagacacagtggttatacctgaa
ccacaagtgaaacggcacagcataacacacaatgataagtcttataatttccgtagtata
cgtgtggactctcctctactactaattgtgaatggaaagagacaagcattgcaaacccaa
acagcgacttcagtcagctacaaaccacactctgaatga
DBGET
integrated database retrieval system
