Silurus meridionalis (southern catfish): 124387538
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Entry
124387538 CDS
T08004
Name
(RefSeq) oxysterol-binding protein-related protein 1
KO
K20174
oxysterol-binding protein-related protein 1/2
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124387538
Membrane trafficking [BR:
smeo04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
124387538
Endoplasmic reticulum (ER) - Golgi transport
Others
Oxysterol-binding proteins
124387538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Oxysterol_BP
Ank_2
Ank
Ank_4
Ank_5
Ank_3
Ank_KRIT1
PH
Motif
Other DBs
NCBI-GeneID:
124387538
NCBI-ProteinID:
XP_046707906
LinkDB
All DBs
Position
6:complement(25628028..25684671)
Genome browser
AA seq
965 aa
AA seq
DB search
MQCWTKHSQPPDNSRFGLTNGKTQSNGGWTTLHLASYFGQKDIVEELLKSGVKVNVQNDV
GDTALHIAALSGRKEVVLLLLRYGACATLLNGCAQTPRDITDDDEVITMLEAAERRECRK
VQERLLNAARDGDCGAVAQLFSKNRPPDVNCKDSNGDTALHLAAYRGHKQCVDVLVKNGA
SYSAMNKNGQSVLDVASDNEMRLFLEKCQENTTCITARTFEGLLWKKSDFLSWNSHWVVL
ENGTVSWYCNQSDAVCGDRRQGCKPLMKAQCVVKAWDKYFFMLRCCDGSAHHFKVSSTCA
EPEITRKKWVDAIEEHAMYSALCGSSDKTPVQAGVEAVAEELDLAHFLSQSLEAAESYQK
MLESQVAMFVSMLKNEENNSPELLKAREICELCSETNSVLRHCVDLLSQREEVWSVKLEQ
EVEKNKILSDALQKLATEHDQLKQKLSSGRKLPTQSAPAEDEFYDALSGGVPQVRQENRW
REGIRDLGSEQRRDVRKGGFRVTRCACPLTSAHLLSHLYTKTEALTPVTMSREERHGDKT
HHNGVKKYRTSLPAPMFSRNDVSIWSILKKCIGMELSKIAMPVIFNEPLSFLQRLTEYME
HTYLIHQANASTDSIHRMKCVAAFAVSAVASQWERTGKPFNPLLGETYELIRDDLGFRWM
SEQVSHHPPVSAFHAEGLNDDFVFHGSIYPKLKFWGKSVEAEPRGIITLELPKQKEAYTW
TNPTCCVHNIIVGQLWIEQYGNVEVINHKTGERCCLTFKSCGLFGKELHKVEGYILDKSK
KKICAIYGKWTECLYAVDPATFDLHKKADKKNVEEKKVSKQSSVDEEAEEMPPPEAETVQ
VIPGSELIWRISPRPENSAQYYAFSKFAMQLNELEEDMKQNLPITDCRFRPDIRAQENGD
IDLASAEKKRVEEKQRVARKNRSKSNDEWKTRWFHQGANPHNGGQDWLYTGGYWSRNYSQ
LPDIY
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgttggacgaagcacagtcaaccccctgataattcccggttcggactaactaac
ggaaaaacacagtctaatggtggatggacgacgcttcacctggctagctactttggccag
aaagatattgttgaggaactgttaaagagcggcgtgaaagtgaatgttcagaatgatgtc
ggggacacagctctacacattgcagccctgagtggaagaaaggaggttgttctgctgctg
ttacgctacggtgcatgtgccacgctactcaacggatgcgcgcagacccccagggacatc
accgatgatgatgaagtcattactatgcttgaagctgcagaaaggagggagtgcaggaag
gtgcaggagagacttttgaatgcagcaagagatggagattgtggtgctgtagcccagttg
tttagcaagaacagacctccagacgtcaactgcaaggactcgaatggggacacggcatta
caccttgcagcctacagggggcataaacagtgtgtggatgtgctggtgaagaatggagcc
agctacagtgcaatgaacaaaaatggccaatctgtgctggatgttgccagtgacaatgaa
atgagactctttttggagaaatgtcaagaaaatacaacatgtatcacagctagaacgttt
gaagggcttctgtggaagaagtcagattttctgagctggaactcccactgggttgttctg
gagaacgggactgtgagctggtactgtaaccagtcggatgcagtgtgtggagatcgtagg
cagggttgtaagcctcttatgaaggctcagtgtgtggtaaaagcctgggataaatacttt
ttcatgctcaggtgttgtgacggcagtgcgcatcactttaaagtgtcctctacatgcgct
gaaccggaaatcaccaggaaaaaatgggtggatgctatcgaggagcatgccatgtacagc
gccctctgtgggagctcagataagacacctgtacaggcaggagtagaggcagtggctgaa
gaactggacctggcacactttctgtcacagtctcttgaggcagctgaaagttaccagaag
atgctggaatcccaggtggccatgttcgtctctatgctcaagaacgaggaaaacaacagc
ccagagctcctcaaggccagagagatatgtgagctgtgcagtgagaccaattcagtgttg
aggcactgtgtggatctcctgtcccagcgtgaagaggtgtggagtgtgaagttagaacag
gaagtagaaaaaaacaagatactatccgatgctctgcagaagttggcgacagagcatgac
caactaaagcaaaagctttccagcggcagaaaattgccaactcagagtgcacctgccgag
gatgaattttacgatgctctctctggtggagttccacaggtgcgccaggagaacagatgg
agggagggaataagggatctcgggagtgagcaaaggagggacgtaaggaagggagggttc
cgtgtgacccggtgtgcatgtcctctgacttcggctcatcttctgtctcatctctacaca
aaaacagaagctctcactcctgtcaccatgtctagggaggagcgccatggagacaagacc
caccataacggtgtgaagaaatacagaacatctcttccggctccaatgttctcaagaaat
gatgtgagcatttggagcatcctcaagaaatgcattgggatggaactgtctaaaatcgca
atgccagtcatcttcaatgagcctctgagtttcctgcagcgccttacagaatacatggag
cacacatatctcatccaccaagccaacgcctccacagactccatccatagaatgaagtgt
gtggctgcatttgccgtttccgctgtggcatcacagtgggagaggactgggaagcccttt
aacccactcctgggagaaacatatgagctaatcagagatgatctgggctttcgttggatg
tcagagcaggtgagccaccacccacccgttagcgcattccatgccgaaggcctaaatgat
gacttcgtgtttcatggatccatctaccccaaactgaagttctggggaaaaagtgtggag
gctgagccacgtggaatcatcactctggagctccccaaacaaaaggaagcatacacttgg
accaatcctacatgctgtgtccataacatcatagtgggtcagctgtggatcgaacaatac
ggcaatgtggaggtcattaaccataaaactggtgaaaggtgctgcctgactttcaagtca
tgtggcctttttgggaaagaactgcacaaagtggagggttacatacttgataaaagcaaa
aagaaaatatgtgccatttatggcaagtggactgaatgcctgtacgccgtggacccggct
acgtttgacctccacaaaaaagccgataagaaaaatgttgaggaaaagaaagtcagcaag
cagagcagtgtggatgaggaggctgaggagatgcctcctcctgaggccgagaccgtgcag
gtcatccccggcagcgaactcatctggaggatatcaccaagaccggaaaactcagctcag
tactatgccttctcaaaattcgctatgcaactgaatgagctggaggaagacatgaagcag
aatctccccattacagactgtcgctttcggcctgatattcgcgctcaggagaacggagac
atagatttggccagcgctgagaaaaagagagtggaggaaaaacagagagtggcgagaaaa
aaccgctccaaatccaacgacgagtggaagacgaggtggttccatcaaggtgcaaaccca
cacaatggaggacaagactggctttacactgggggctactggagcaggaactactcccaa
ctacctgacatatactaa
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