Silurus meridionalis (southern catfish): 124387693
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Entry
124387693 CDS
T08004
Symbol
ppp2r5b
Name
(RefSeq) serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit beta isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03015
mRNA surveillance pathway
smeo04110
Cell cycle
smeo04114
Oocyte meiosis
smeo04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124387693 (ppp2r5b)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
124387693 (ppp2r5b)
04114 Oocyte meiosis
124387693 (ppp2r5b)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
124387693 (ppp2r5b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smeo01009
]
124387693 (ppp2r5b)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124387693 (ppp2r5b)
03036 Chromosome and associated proteins [BR:
smeo03036
]
124387693 (ppp2r5b)
Protein phosphatases and associated proteins [BR:
smeo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
124387693 (ppp2r5b)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
124387693 (ppp2r5b)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
124387693 (ppp2r5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
124387693
NCBI-ProteinID:
XP_046708154
LinkDB
All DBs
Position
6:14581120..14607178
Genome browser
AA seq
503 aa
AA seq
DB search
MDQPTKLPPSSPSSPTAAFSVPSAEKVDGFPRRSMRRARQRRSHSSSQFRYQSSQVELTA
LPLLKDAPVAELHDLFCKKLQQCCVLFDFLDCVADLKGKEIKRAALNELVESVATSRGIL
IEPLYPEAIKMISVNIFRTLPPSENPEFDPEEDEPTLEASWPHLQLVYEFFLRFLESPDF
QPSMAKRYVDQKFVLQLLELFDSEDPREREYLKTILHRVYGKLLGLRAYIRKQINNIFLR
FIYETEHFNGVAELLEILGSIINGFALPLKSEHKQFLVRVLIPLHTAKSLSIFHAQLAYC
VVQFMEKDATVTEYIIRGLLKYWPKTCTQKEVMFLGEIEEILDVIEPSQFIRVQDPLFKQ
IANCISSPHFQVAERALYFWNNEYILSLIEENCQVILPLVFGTLYRVSKEHWNQTIVSLI
YNVLKTFMEMNTKLFDDLTASYKVEKQKELKREKERAELWKGLEEQEERRLQSLGEASRN
QKNLQDRENLSKNEPESSAGNAT
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggatcagcccaccaagcttcctccgtcgagtccatcctcgcccacagcggccttctct
gtgcccagtgctgagaaggtggatggctttccacgccgctccatgcgcagggcccgccag
agaaggtcacacagctcgtcgcagttccgttaccagagctcgcaggtggagctcacagct
ctgcctcttctcaaagatgccccagtagcagagttgcatgatctgttttgtaagaagctg
cagcagtgttgtgtgctctttgacttcctggactgcgttgctgacctgaaggggaaggag
atcaagcgtgctgcactgaatgagctagtggagagtgtggccaccagccgtggcatcctc
attgagcccctatatcctgaggccatcaagatgatctcagtgaacattttccgtactctg
ccacccagtgagaacccagagtttgatccagaagaggatgaacccacactggaggcctcc
tggccccatttacagctggtctatgagttcttcttacgcttcttggagagtcctgatttt
caaccctccatggccaaacgttatgtggatcagaaatttgttctgcagttgctggagctc
tttgatagtgaagaccccagagagagggaatatctgaagaccatactgcatcgtgtctat
ggcaaactgcttggcctcagagcgtacattcggaaacagatcaacaacatcttcctcagg
ttcatttatgaaactgaacactttaatggagtggctgaactgctggagatattgggaagt
atcattaatggctttgctttgcctctgaagtcagaacataagcagtttctggtgagggtc
ctgatccccttacacactgccaaatctctgtccatctttcatgcacagcttgcctactgt
gttgtgcagtttatggagaaagacgctactgttacagaatatatcatcagaggattgctg
aaatattggcccaaaacatgcactcagaaagaggtgatgtttctgggggagattgaagag
attctggatgtgattgagccatcacagttcattcgtgtgcaggatccactttttaagcag
atcgccaactgcatttccagcccccacttccaggttgcagagcgggctctgtatttctgg
aataatgagtatattctgagtctgatcgaggagaactgtcaggtcatcctgccactggtc
tttggcacgctttacagagtctccaaagagcactggaaccaaactattgtgtcacttatt
tacaacgtcttgaaaacctttatggagatgaatactaagctgtttgatgaccttactgcc
tcctacaaggtggagaaacagaaggagctgaagagggagaaggagcgtgctgagttgtgg
aagggtttagaggagcaggaggagcgaaggctgcaaagtcttggggaagcaagtcgcaac
caaaagaacctgcaagaccgagagaatttgagcaagaacgagccagagagcagcgctggc
aatgccacctag
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