Silurus meridionalis (southern catfish): 124387732
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Entry
124387732 CDS
T08004
Symbol
eif4a2
Name
(RefSeq) eukaryotic initiation factor 4A-II
KO
K03257
translation initiation factor 4A
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124387732 (eif4a2)
03012 Translation factors [BR:
smeo03012
]
124387732 (eif4a2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124387732 (eif4a2)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
124387732 (eif4a2)
mRNA cycle factors
Stress granule specific factors
124387732 (eif4a2)
Translation factors [BR:
smeo03012
]
Eukaryotic type
Initiation factors
eIF-4
124387732 (eif4a2)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124387732 (eif4a2)
Exosomal proteins of bladder cancer cells
124387732 (eif4a2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_22
Flavi_DEAD
UvrD-helicase
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
124387732
NCBI-ProteinID:
XP_046708217
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All DBs
Position
6:3833053..3839037
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AA seq
411 aa
AA seq
DB search
MSSGSGDYHSSRDRDHGGPEGMEPDGVIESNWNEITDNFDDMNLKETLLRGIYAYGFEKP
SAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIDQKETQALVLAPTRELAQQ
IQKVILALGDYMGASCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRFLSPKW
IKMFVLDEADEMLSRGFKDQIYEIFQKLSTNIQVVLLSATMPAEVLDVTTKFMREPVRIL
VKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHAR
DFTVSALHGDMDQKERDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNREN
YIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtggttctggtgattatcatagctcaagagatcgagaccatggagggcctgaa
ggaatggagcccgatggcgtcattgagagcaactggaatgagatcacggacaacttcgat
gacatgaacctgaaggagacgctccttcgaggaatctacgcgtatggttttgagaagccg
tcagctattcagcagcgagcgattattccctgcattaaaggatacgatgtcattgctcaa
gcacagtcaggcacaggcaaaacagccacgtttgccatctctatcctgcagcagttggag
attgatcagaaagagactcaggctctggtcctggcgccgacccgtgagcttgctcagcag
atccaaaaggtcatcttggccttgggtgactacatgggtgcgtcgtgccatgcctgtatc
gggggcaccaacgttcgcaacgagatgcagaagcttcaagccgaagctccacacatcgtg
gtggggactccggggcgtgtgtttgatatgctgaacaggaggtttctctctcctaaatgg
atcaagatgtttgtcctagatgaagcagatgaaatgctgagtcgtggtttcaaggatcag
atttatgaaatcttccagaaactgagcacaaacattcaagtggtgctcctttcggccact
atgcccgccgaggtcttggacgtgaccacgaagttcatgcgcgagcccgtgcgcatcctg
gtgaaaaaagaggagcttaccctcgagggtattaagcagttctacatcaatgtagaacga
gaggaatggaagttggacacgctctgcgatctgtacgaaactctgacgatcacacaggcc
gtcattttcttgaacactaggagaaaggtggactggctgactgagaaaatgcacgccagg
gacttcaccgtgtctgccttgcatggggacatggatcaaaaagagcgtgatataatcatg
agagaatttaggtctggctctagtagagtgctgattaccacagatttgctggctcgtggt
attgacgtgcaacaggtttccctggtcatcaactacgatcttccgacaaaccgagagaac
tatatccataggatcggccgcgggggtcgtttcggcagaaaaggcgtggccattaacttc
gttaccgaagaggacaaacggatccttcgagacattgagacgttttacaacacgaccgtg
gaggagatgcccatgaacgtggccgatctgatttaa
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