Silurus meridionalis (southern catfish): 124387746
Help
Entry
124387746 CDS
T08004
Symbol
arhgap21b
Name
(RefSeq) rho GTPase-activating protein 21 isoform X1
KO
K20315
Rho GTPase-activating protein 21/23
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124387746 (arhgap21b)
Membrane trafficking [BR:
smeo04131
]
Endosome - Golgi transport
Others
Others
124387746 (arhgap21b)
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
124387746 (arhgap21b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
PH_9
PDZ_6
PDZ
PDZ_2
PH_11
PH_21
Motif
Other DBs
NCBI-GeneID:
124387746
NCBI-ProteinID:
XP_046708231
LinkDB
All DBs
Position
6:complement(4899728..4925595)
Genome browser
AA seq
1688 aa
AA seq
DB search
MATGRRSNEDQAGYSVHAPLCQDVFEQESAASMLQAEDEEFSWPGPKTVRLRRTSLGFGF
TLRHFIVYPPESAVNSTYKDEDGDYRGRARNRLEPMDTIFVKQVKEGGPAHEAGLCTGDR
IVKVNGESIIGKTYSQVITVIQNSETFLELSVMPKDEDILQLAYSQDAYLKGHDAYSGNA
RHIPEPPSVCYPRVDCKPLGMAEATEVPPSGGVQSDLGYRVEIPVPPSPPARVPKTQTAV
CVCNESVRTVLVPADAHTGVPGEYGHVSPDPMLLRTRSYLHPRKPDLYSPSYHGESFAVP
APLYHPSASTVSPASHQNIDWRTYQTYREYIDHKGLHAYSRTIQERLDSLRAAAATSQSS
SNFAQKNMWGNKIRRRSTSYDRSYQGPTMLPPRSASQDRMTGVERASRAQDWPPRSSSDG
IIRNTRFHSTDYIEHGDMVPWPVDRRGYAPVEQGPRPNRQPVLPKPGIYSHSYGNGVRGR
SSPHQLSCRTDIPPPAVSTDRIQRVTKTQPKEVQLGKDQRLHVSNHVTANQQSRTRTKTM
QSPEPVIEALVGQRSTSCSVPTPQRQAQRGALGQRIHPRALKGLPVNGCSSVEGVVMREK
PATGKSAPLRHPSYIQAQEHQDSLFSSANLNESLDSIPFIDEPASPSVDRDGSHISASAV
ISMAQSAAGDSVSSSTPSPHMRRQLSHDQESLRSAILEQSGTKTERSKSYDEGLDTYREE
GRRRSSKPSLKVFRKAPDGHKSDDSSSRRDSCSDIFTDFFKEGWLHFRQLNTDKNKRVGG
GMRTWKQMYAVLRGHSVFLYKDRKEAHVHSQMDDEPQQVSIKACLIDISYSETKRKNVFR
LTTSDCEYLFQAENRDDMLSWIRAIQENSNLDDENAGVTSTDLINRKIKEYISLSAPTSK
TEPSPKVLRQSLSIRHTLLGVAGGRSQSTHSPRNELERSSRDDSSPPRDKAAWKRGIPGL
KKKPQEKKPGVMFGVRLDNCPPAHGNRFVPLIVEVCCKLVEERGLEYTGIYRVPGNNAAI
SSMQEELDTKGMTDIDLLDDKWRDLNVISSLLKSFFRKLPDPLFTNEKYSDFIDANRTED
GVERLKVLKRLIHELPEHHYETLKFLSGHLKTVSENCEKNKMEPRNLAIVFGPTLVRTSE
DNMTHMVTHMPDQYKIVETLIQQYDWFFAEDGDEEPVACVEAESTVQSQPVPNIDHLLTN
IGRTAPSPGDVSDSATSDSAKSKQGSWGSGKDQYSRELLRSSIFANRKRKKPKDKPQMSS
SEDDLDTSFSKKELQDESVTNNDQNEVAESDAGALHRLDRRRDDDDPRVEKNLVRVPNEF
QSDILPLKTTQFDKLGKIESPKKHRGQRERDVARENSLSDPPSTSHDEGCVSDLGTLNST
SSQASGPRLRKGRTPGPWMENAGAEVCSITSDYSTTSSMTFLTGIEFTALSPAHDADDER
SELISEGRNIDSDSESNLSMFPLARDDGASEDVVSVQEESGVTPFQSSSSLLVSQRIVAG
DTLARKRGSRQKTESESSQDGESQISKTAGKSGESDPVWRIKITDRLKCRLRASADDMFG
VGAQRTRSPETRSKRKTNIRRRHTMGGQRDFAELSVLTGAELSAMDRLKPKCSSQDFSIT
DWIVRERHRTSNPEVSLDGSDLFSGGASGSGSGMTNGETLKNFSLASDAHPHKLSGAQVV
RSRFYQYL
NT seq
5067 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaggtcggaggagcaatgaggaccaggcgggttacagcgttcacgctccgctg
tgtcaggacgtgtttgagcaggagtctgcagcgtccatgttgcaggcggaggatgaggag
ttctcttggcccggtccgaagacggtgcggctgcggcgtacgtctctgggcttcggcttc
accctgcgccacttcatcgtctaccctcccgaatccgccgtaaattccacttacaaggat
gaggatggggattacagaggacgagctcggaacagactggagcccatggacaccattttt
gtgaagcaggtgaaagagggagggcctgcacatgaagccgggctctgcacaggagatcgt
attgtcaaggtgaacggagagagcatcattgggaaaacgtactcgcaggttattacagtg
atccagaacagtgaaacctttctggagctgagcgtgatgcccaaggatgaggacatacta
cagctggcgtactcacaggatgcctaccttaaaggtcacgatgcctacagcggaaacgct
cgccacatcccggagccgccttccgtatgttacccacgagtagactgtaaacccctcggg
atggccgaggcaacggaagtccccccctcagggggggtccagtctgatctgggataccgt
gtggagatacctgtacccccttcgccaccagcgagggtcccaaagactcagacggcggtg
tgcgtgtgcaacgaaagcgtcaggacggtgttggtgccggcggatgcccacacgggggtt
cctggggagtacggccatgtgagtcccgatcctatgctgttgagaacgaggtcgtacctt
cacccacgcaaaccggacctgtattcaccaagttaccatggagaatcgtttgccgtccca
gcacctctttatcatccgtctgcttccaccgtctctccggcttcccatcaaaatatcgac
tggcggacgtatcagacctacagggaatacatcgaccacaaaggcctccatgcgtacagc
cggacgattcaggagcgcctggacagtttgcgtgctgccgcggccacctcccaaagttcc
tcgaactttgctcaaaaaaacatgtggggcaataaaatccgacgccggagtacctcatac
gatcggtcctatcaaggacctaccatgcttccgcctcgaagtgcttcccaggatcggatg
accggggtggaaagagcgtcccgggcacaagattggcctcctcggagctcctcggatggg
atcatcaggaacactcgttttcattccaccgactacatcgagcatggtgacatggttcct
tggcctgttgatcggagaggttacgccccggtggagcaaggacctcgccccaatcggcag
cccgtccttccgaaaccgggaatctactcgcattcttacggaaatggcgttcgaggccga
tccagtccacatcagctgagctgtaggacagacatccctcctcctgctgtttccaccgac
aggatccaacgcgtcaccaaaacccagcccaaagaggtgcagttgggtaaagaccaaaga
cttcacgttagtaatcacgttacggctaaccagcagtccaggactcgcaccaagacaatg
caaagtccagaaccggtcatagaagccttggttggtcaaaggtcaacgtcctgctcggtg
cctactcctcagaggcaggcgcaaagaggagctctggggcagaggattcaccctcgggct
ctcaagggattaccggtgaacgggtgcagctcggtggaaggtgtcgtgatgcgagagaaa
cccgccacgggaaagagcgctccgctacgccatccctcctacatccaggcgcaggagcat
caagactccctgttcagctctgcaaacctgaacgaatcgctcgactccatccccttcatc
gatgagccggcgagtccgagtgtggatcgtgatgggagtcacatctctgcgtcagctgtg
atctccatggctcaaagtgcagcaggagactcggtcagctccagcacgcccagccctcac
atgcgcagacagctgtctcacgaccaggaatctctccggagcgctatcctggaacagagt
ggaaccaaaacggaacgctccaaatcgtatgatgaaggtttagacacgtacagggaggag
ggccggcggcgttccagtaaacccagtctgaaggtgttcaggaaggctcctgatggccac
aaatcggatgactccagttcccggagagactcctgctctgacatcttcaccgatttcttc
aaggagggctggctgcatttccgtcagctcaacacggataagaacaaacgcgtcggcgga
ggaatgcgcacgtggaagcagatgtacgcagtgttgcgaggacactcggtcttcctctac
aaggacaggaaggaggctcacgttcactctcagatggatgatgagccgcagcaggtgagc
atcaaagcctgcctgatcgacatctcctacagcgagaccaagcgcaagaacgtcttccgg
ctcaccacgtccgactgcgagtacctgttccaggccgagaaccgcgacgacatgctgtcc
tggatacgcgccattcaggagaacagcaacctggatgatgagaacgccggtgtgacgagc
accgacctgatcaacaggaagattaaagagtacatctctctgagtgctcctacgagtaag
actgaaccttcccccaaagttttgcgacagtctctgagcatcagacacacactgctggga
gtagcagggggcaggagtcagagcacacactctcccaggaatgagctggagaggagcagc
agagacgactcgagtccacctcgagacaaagctgcttggaagagaggaatcccagggctg
aagaaaaaaccgcaggagaagaagccgggagtgatgttcggagtgagactggacaactgt
cctcctgcacacggcaacaggtttgtgcctctgatagtagaggtgtgctgtaagctggtg
gaggagagaggtttggagtacaccgggatctacagagtccccgggaacaacgcagccatc
tccagcatgcaggaggagctggacactaagggaatgactgacatcgatctccttgacgac
aaatggagggatctaaatgtcatctccagtttactcaaatcgttcttcaggaagctccca
gacccactgtttactaacgaaaagtattcagattttattgacgctaatcggacggaggat
ggagtagaaagattaaaagtgctgaagagactgattcatgagcttcctgaacatcattat
gaaacgctgaagttcctttctggacatctaaagaccgtctcggagaactgtgagaagaac
aagatggagccgcgtaacctggccatcgtgtttggtccgacgcttgtccgaacctcagag
gacaacatgacgcacatggtcactcacatgcctgaccagtacaagatcgtggagacgctc
attcaacagtatgactggttctttgcagaagatggagatgaggaacctgtagcgtgtgtg
gaggcggagagcacggttcagtctcagcctgttcccaacatcgatcacctgctcaccaac
atcggacgcaccgccccctcacctggagacgtctcagattcagctaccagtgactctgcc
aaatcaaagcagggctcctggggctcaggtaaagaccagtacagcagagagctgctgcgc
tcctccatcttcgccaatcgcaagcgcaagaaacccaaagacaaacctcagatgagcagc
tcggaggacgacctggacaccagcttctccaagaaagagcttcaggatgagagcgtgacc
aacaacgatcaaaacgaggtggcagagagcgatgcaggggcactccatcgtctagaccga
cgccgcgatgatgacgatccgagggtggaaaagaacctcgtccgcgtcccgaacgaattc
caatccgacatcctgcctctgaaaacgacgcaatttgacaaactcgggaaaatcgagtct
cccaaaaagcaccgggggcagagggagagagacgtggcgcgtgagaactcgctctcggac
cctccgtccacctcgcacgacgagggctgcgtttccgacctgggaactctaaacagcacc
agctctcaggcgtccggcccccggctccggaagggccgtacaccggggccgtggatggag
aacgccggggcggaggtgtgctctatcacgtctgattactccactacgtcgtccatgacg
ttcctgacagggatcgagtttacggcgctgagtccggctcacgatgccgacgacgagagg
agcgagctgatcagcgagggcaggaacatcgactctgacagcgagagcaacttgtccatg
ttccctctcgcccgagacgacggggcgtccgaagacgtggtgtctgtgcaggaagaaagc
ggggtcacgcctttccagagctcctccagcctcctggtgtctcagcgcattgtcgcgggc
gacacgctggcgcgcaagagaggcagccgacagaaaaccgagagcgagtcgtcgcaggac
ggcgagtcccagatttccaaaacggcggggaaaagcggcgagagcgaccccgtctggcga
atcaaaatcaccgaccggctcaagtgtcgactccgggcctctgcggacgacatgttcggc
gtcggggcgcagcgcacgagatctcccgagacacgcagcaaacgcaagaccaacatccgc
cggcgccacaccatggggggacagagagacttcgccgagctgtcggtcctcaccggcgcc
gaactctccgccatggaccgcctgaaacccaaatgcagctcgcaggacttttccatcaca
gactggatcgtcagagagaggcatcgcaccagcaacccagaagtcagcctggacggttcg
gacctgttctccggtggggcctcggggtccggctcggggatgaccaacggagaaacgctc
aaaaacttcagcttggcctccgacgctcatccacacaaactgtctggggcacaggtggtg
cgctcgcgcttttaccaatacctgtga
DBGET
integrated database retrieval system
