Silurus meridionalis (southern catfish): 124387805
Help
Entry
124387805 CDS
T08004
Name
(RefSeq) desmoglein-2-like
KO
K07597
desmoglein 2
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124387805
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smeo04515
]
124387805
Cell adhesion molecules [BR:
smeo04515
]
Cadherins
Major cadherins
124387805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Fibulin_C
RibLong
Motif
Other DBs
NCBI-GeneID:
124387805
NCBI-ProteinID:
XP_046708355
LinkDB
All DBs
Position
6:26455015..26472778
Genome browser
AA seq
1006 aa
AA seq
DB search
MAPFLTFCFFFITIFCSKVITVEAVDREMQTLHRQKREWFIPPVKLMENEDYTKKTYIAK
IRSDEETRMNIEYSLLGDAVDEGLFSVNKKNGHVKIHGILNREEKAVYNLKGRATFPDGS
CAETDLNLKVVVEDQNDCAPVFEIQMVGFVDELSEKDTYVIVVTASDADDNTTANAKIAY
RIIQQEPVGEMMFNIHRSSGEIKVRINTLDREKQETYKLIIIGTDMDGFNSDPQNRPLTG
TGTLTINIRDVNDNVPELEDTSYNCTVKETIRNVEAIRLKATDKDKPYTENWEAVYTIIS
GNENGYFNITTDPKTNEGILIVTKELDYETMKKIDLVVVVNNKAPYHKSVVLGKQKTYPV
KIKVLNELEAPFFQHPVKVISITENRTTIDLKKVIVTFTAMDSDTLLTATDVRYLKGEDV
NNLVSINEQTAEVRLNKYPEHKFLKNGEYTAKIVCITNDVSPKTATGTLVIQVQDLKNHC
PIQISPHGKMCYGDSVVYVTAKDEGKYTNANSFKYKMVSKGTKENWSCEKHNTTTVILHS
QEILWPGYYTVGIVVQNQEEKSCEVQKLQITVCTCTEAKVCQYARQSGTSAVLGIGGVLV
FLLVILLLFAILMILLLCECRRGFRKFQAFPFEEEQRHIVYHIEGRGEDQELELISQLPV
NVAAGSSGQFIDACEDWRKYGWESQEEYINNHLLINQYEGDYVDKNATTLSGGPFEHVGT
IAGMALPQTFFHKYYEKKTLELMIQEGSTDELLVSDYETCGSVTSSTDCLGCLYEEHNLD
FLDDLGPQYKVLAEICCGSVIEPEVRSTHTPPKTISSSSQVGVKVESDGGGVQSEVISVS
ASSSSTTTEITSTNYGGNINSGGATTTATAGQTLLVQQPNVYLSSTPMYIMEQQHQPTLY
LASGPIMGERNMALVENSNMAITHQNTLPWLRLQQANSRVQVDQGIEGTVVQGFSGHLET
QGAAFGSIHVIKNQLMQTQTELVNDQSGEIMVLGNSSVIPNSLSLA
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggcgccatttctgactttttgttttttttttataaccatcttttgttcgaaagtaatc
actgttgaagcagttgatagagagatgcagacactccatcgacagaaaagggaatggttc
atccctccagtgaaactgatggagaatgaggattataccaaaaaaacatatattgcaaag
attcgttcagatgaagagaccaggatgaatattgaatattctctattaggagatgcagtg
gacgaaggattattcagcgtaaacaaaaagaacggacatgtcaagatccatggcatcttg
aacagagaggaaaaggctgtttataatctcaaagggagagctacattcccagatggatcg
tgtgctgaaacggatctcaatttgaaagtcgtagttgaagaccagaatgactgtgcccct
gtgtttgagattcaaatggttggatttgtcgacgaactcagtgaaaaagacacctacgta
attgtcgtcacagcctctgatgcagatgacaacacaacagctaatgcaaagattgcctac
cgaattatacagcaggagccagttggagagatgatgttcaacatccacagatcatcgggt
gaaattaaagtcagaataaacactctggaccgtgagaaacaagaaacgtacaaactgatc
atcattggtacagacatggatggatttaattctgatcctcaaaacagaccattgacagga
acaggaactttaaccatcaacattcgtgatgttaatgacaacgtacctgaattagaggac
acctcttacaactgtactgttaaagagactatcaggaatgtggaagcgattcggcttaag
gccacagacaaggataagccctacacggaaaactgggaggctgtgtacacaatcatctca
ggaaacgagaacggttactttaacatcaccacggaccccaaaactaacgagggaatcctg
atagtcactaaggagctggactatgagaccatgaaaaagatcgacctggtagtggtggtc
aacaacaaggcaccttatcacaaatcagtggttcttggcaagcagaagacctaccccgtt
aagatcaaagtgttgaacgagcttgaagcaccttttttccaacatccggtgaaagtcatc
tccatcactgaaaaccgcaccactattgacctgaagaaggtcatcgtcacattcacagcc
atggacagtgatacgctgttaactgccactgatgtcaggtatttaaaaggagaagatgtg
aacaatttggtgagcattaatgagcaaacagctgaggtcagactgaacaaatatccagaa
cacaagttcttgaaaaatggagaatacaccgccaaaatcgtatgtatcaccaatgatgtt
tcaccaaaaactgcaacgggaacactggtaattcaggtgcaggatttaaaaaaccactgt
cctattcagatcagcccacatggaaaaatgtgttatggagacagtgtggtgtacgtcaca
gccaaggatgaggggaaatacaccaatgcaaacagttttaaatacaaaatggtttccaag
ggcacaaaagagaactggagctgtgagaagcacaatacaacaacagtcattttgcacagc
caggagatcctgtggccaggatactacacagtgggaattgttgtacaaaatcaagaggaa
aagtcctgtgaggttcaaaagcttcagataaccgtgtgcacatgcactgaagcaaaagtg
tgccaatatgcgagacagtctggcaccagtgctgtgctgggaataggtggagttctggta
tttctgctagtaatcctgcttctctttgcaattctgatgattttgctgttgtgcgagtgt
cgaagaggttttaggaaattccaggcctttccctttgaagaagaacagcgacacatcgtc
tatcacatcgaaggtcgaggagaagatcaggaactagaactgatatctcagttgcctgtg
aatgtagctgctggcagcagtgggcaatttatagatgcatgtgaagactggaggaaatat
ggatgggaatctcaagaggaatacataaataaccatttgttaatcaaccaatatgagggt
gattatgttgataaaaatgcaactactctaagtggaggaccttttgaacatgttggcacc
atcgcaggcatggctctgccgcaaactttctttcacaagtactatgaaaagaaaacactg
gagctgatgattcaggaaggtagtacagatgagctgctggtgtctgactatgaaacgtgt
ggttcagtcacaagctctacagactgtcttggctgtttatatgaagaacacaatctggat
ttccttgatgacctcgggccgcagtacaaggtgcttgccgagatttgctgtggatcagtc
atcgaacctgaggtcaggtccactcatacacctcccaaaacaatctcatccagttcacaa
gttggcgtcaaagtggaaagtgatggtggtggtgtccagagtgaggtgatctctgtctct
gcatccagttcatccaccaccacggaaatcacatctacaaattatggagggaatattaac
agtggaggtgcaacaacaacagccactgcaggtcaaaccctgcttgtccagcagcctaat
gtttacctttcctctacccctatgtacataatggagcaacagcatcaacccacattgtat
ctggcctctggtccaataatgggtgaaagaaacatggcactggtggagaattccaatatg
gcaatcactcaccagaacacccttccctggctgaggctgcagcaagcaaactccagagta
caggtggatcagggtattgaaggcacagtggtacaagggttctcaggtcaccttgagact
caaggagctgcatttggttccattcatgtcatcaaaaaccaactaatgcaaactcagact
gagttagtgaacgatcaaagtggagagatcatggttttaggaaactcatcagtcatccct
aattccctttcattagcctag
DBGET
integrated database retrieval system