Silurus meridionalis (southern catfish): 124387923
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Entry
124387923 CDS
T08004
Symbol
pop7
Name
(RefSeq) ribonuclease P protein subunit p20 isoform X1
KO
K14527
ribonuclease P/MRP protein subunit RPP20 [EC:
3.1.26.5
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124387923 (pop7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smeo03009
]
124387923 (pop7)
03016 Transfer RNA biogenesis [BR:
smeo03016
]
124387923 (pop7)
03029 Mitochondrial biogenesis [BR:
smeo03029
]
124387923 (pop7)
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
124387923 (pop7)
Ribosome biogenesis [BR:
smeo03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
124387923 (pop7)
Transfer RNA biogenesis [BR:
smeo03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
124387923 (pop7)
Mitochondrial biogenesis [BR:
smeo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
124387923 (pop7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rpp20
Alba
Motif
Other DBs
NCBI-GeneID:
124387923
NCBI-ProteinID:
XP_046708486
LinkDB
All DBs
Position
6:20241363..20244289
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AA seq
192 aa
AA seq
DB search
MLMPQASVYFRCYSEYFLDFPQSVAATGPNSRTALIPRSCKMAEPRSQVSTSMSQKSLGF
SSSEGPATEMDPVEYTLRKRLPRKLPKRRNDVYINMKTDFKAQLARCQKLLDGGAGHREI
CIHGLGLAINRAINIALQLQAFSQGALQIAANTSTVELIDDLEPEDPDEAGEPLTRTRNN
SAIHIKVFYPNA
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgctgatgccacaggcaagtgtgtacttccggtgttattccgagtacttcctggatttt
ccgcagtcagttgcagcgactggccccaacagcagaacagctttaatccccagaagctgc
aagatggcagagcctcgaagtcaggtctcaacttccatgtcacagaagtctttgggattt
tcatcctctgaggggccagcaacagagatggacccagtggaatacaccctccgcaagcgg
ctccccaggaagctaccaaagaggcgcaatgatgtgtacatcaacatgaagactgacttc
aaggcccagctggccaggtgtcagaagctgctggatggaggtgcaggtcacagagagatc
tgcattcatggcctaggccttgctatcaatcgggccattaacattgctctgcagttgcag
gcattcagccagggggcacttcagattgctgccaacacctccactgtagagctcatagat
gatctggaacctgaggatccagatgaagccggggagccactaacacgcacacgtaacaac
tctgccatccacatcaaagtgttctaccccaatgcttaa
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