Silurus meridionalis (southern catfish): 124387960
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Entry
124387960 CDS
T08004
Symbol
sox19b
Name
(RefSeq) transcription factor Sox-19b
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124387960 (sox19b)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
124387960 (sox19b)
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
124387960
NCBI-ProteinID:
XP_046708529
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Position
6:complement(15659167..15662367)
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AA seq
295 aa
AA seq
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MMYSMMEHELKSQSGQPNPHPNSQIMSQHGVAGGNVPQAAPKSACPPGADPMDKVKRPMN
AFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRAAHMKEYP
DYKYKPRRKSKPPVKKDNPAAKYPPLPGGSLLAAAHAQSGSPRVDSYGWGPAGGYAAVQG
DALAYQQQLHRYELPLQYAAPMSQTYMNGANSYSPMSYSSSPQQPSPVMSMVKPEAFTHS
PTGASNHHRGAVQGDLRDMISMYIPGGDVGDPTAQRGYTSVQQHYLGSTVPLTHI
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacagcatgatggagcacgagctcaagagccagtcgggtcagcctaatcctcac
ccaaacagccaaatcatgtcgcagcacggcgtcgccggcggaaacgtgccccaggcggct
ccgaagagcgcgtgcccgcccggcgcggaccccatggacaaggtgaagcggcccatgaac
gcgtttatggtgtggtcgcgggctcagcggcgcaagatggcccaggagaacccaaagatg
cacaactctgagatcagcaaacgcttgggcgccgagtggaaactgctgactgacgccgag
aagcggccgttcatcgacgaggcgaagcggctgcgcgccgcgcacatgaaggagtacccc
gactacaagtacaaacctcggcgcaagagcaagccgccagtgaaaaaggacaaccccgcc
gccaagtaccctccgctcccgggaggcagcctgctggccgcggcgcatgcgcagagtgga
agtccgcgtgtggacagctacggctggggtcctgctggaggctacgcggcggtgcagggt
gatgctctggcttaccagcaacaactgcaccggtacgagcttccactccagtacgcagcg
cccatgtcccagacctatatgaatggcgccaactcttacagcccaatgtcctacagcagc
agtccccagcagcccagtcctgtaatgtctatggtcaagccggaggccttcactcactca
cccaccggagcatcaaaccaccaccgtggggcagttcaaggtgaccttagggacatgatc
agcatgtacatccctggaggtgatgtaggggaccctacagcacagaggggttacacaagt
gtccagcagcactatctgggcagtactgtgcccctgacacacatctga
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