Silurus meridionalis (southern catfish): 124388016
Help
Entry
124388016 CDS
T08004
Symbol
taf6l
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124388016 (taf6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smeo03021
]
124388016 (taf6l)
03036 Chromosome and associated proteins [BR:
smeo03036
]
124388016 (taf6l)
Transcription machinery [BR:
smeo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
124388016 (taf6l)
Coactivators
SAGA/TFTC/STAGA complex
124388016 (taf6l)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
124388016 (taf6l)
STAGA complex
124388016 (taf6l)
TFTC complex
124388016 (taf6l)
SAGA complex
124388016 (taf6l)
SLIK complex
124388016 (taf6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
GlnD_UR_UTase
Motif
Other DBs
NCBI-GeneID:
124388016
NCBI-ProteinID:
XP_046708595
LinkDB
All DBs
Position
6:complement(12263921..12270441)
Genome browser
AA seq
640 aa
AA seq
DB search
MSEPREERRFAEVSRDSIKLMAESAGVELPDDLASMLAEDVCYRLREATQNSSQFMRHAK
RRKLTVEDFNRGLRWSNTEVVCGYGAQDAVPFRSLKEGELFFVEDREVNLVELALATNIP
KGCAETTVRVHVSYLDGKGNLEPQGTVPVAVQSLSDDLLKYYQQITRAILGEDPHLMKVA
LMDLQSNSKIAALLPYFVYVISGVKSVSHDLDQLNRLLHMVKSLVQNPYLYLGSYVRSLV
SSVMYCILEPLAASINPLNDHWTLRDYAALLLSHIFWTHGDLVSGLYHQILLSLQKVLSD
PVRPLCSHYGAVVGLHALGWKAVERVLYPHLPAYWANLQAVLDDYSVSNAQVKADGHKVY
GAILVAVERLLKMKALSLTAEGSPAALQSSAGGGMRFRESSPGLSPPPEPLSEAPLGIAS
HLQAAGTGCQWEEWTPVSLPAMYCELYSFFGDSLAVRFSTGPALGSAPPAASVHPSDARK
ETGSGAGSIESTRKMPQLTASMNLSPRPDGSPRTETVPPILGATASGRSLARSSSSSSSA
VPRSRSSSRPGRSANQSRDIFPKARFLPSQVGPPAFSFLIGGRQMGRRCQGRRFQTSFTP
NPSVSSLPPRAYAHKLPVIGRVSKPVRRWTCSHYSLYLPL
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcccagagaagagcgtcgtttcgctgaagtctcccgagactccatcaagctg
atggcggagagcgccggtgtggagctgcctgatgacttagcgtcgatgctcgcggaggac
gtgtgttaccgcctcagagaggcgacgcagaacagctctcagttcatgagacacgccaag
agacgcaaactgactgtagaggactttaatagaggactgcgctggagcaatactgaggtt
gtttgtggttacggtgcccaagatgccgtaccattccgatccctgaaagagggcgagctt
ttctttgttgaggatcgggaggtgaacctggtcgagttggctcttgccaccaacataccc
aagggctgtgctgagacgaccgtgcgagtgcatgtatcttatcttgatggaaaaggaaat
ctggaacctcagggcacagtccccgttgctgtgcagtctctgtcagatgaccttctcaag
tattaccagcagatcactagagccatattaggagaagatccacatctaatgaaggttgct
ttaatggatcttcagtccaactctaagattgctgctctcctaccttattttgtttacgtc
atcagtggggtgaagtcagtaagtcatgatctggatcagctgaaccggctgttgcacatg
gtgaagagtctggttcagaacccatacctgtatcttggttcctatgtgcgcagtctggtc
tccagcgtcatgtattgcatcttggagccacttgctgcctctatcaatccactaaatgac
cactggaccctgagagactatgctgctctgctgctcagccacatattctggactcatggt
gacctggtgagtggactgtatcatcagattctgttgtcactgcagaaggttttgtcagac
ccggtgcgtcctctgtgctctcactatggagctgtggtggggttgcacgctctcggctgg
aaggctgttgagcgtgtgttgtatccccacctgcctgcatactgggcgaatctccaagcc
gtgctggacgattactctgtttctaacgcacaagtaaaagcagatgggcacaaggtctat
ggagccattcttgtggcagtggagcgtctgctaaaaatgaaagctttgagtttgacagca
gaaggaagtcctgctgctcttcagagttctgcgggaggagggatgcgctttcgagagagc
tcaccaggcctcagtcctccccctgaacccctctctgaagctcctctgggtatcgcaagc
cacctgcaagcagctggaacaggctgccagtgggaggagtggaccccagtgtccctgcct
gccatgtattgtgagctctactcgttctttggagacagtttggctgtgcgttttagtaca
gggcctgcattaggcagtgcaccaccagcagcctcagtgcatccttctgatgccaggaaa
gagacagggagtggcgcaggcagcattgagagcacacgcaagatgccacaactcactgcc
agcatgaacctcagccccagaccagatggaagcccacggactgagactgtaccacctatt
ctgggtgctactgcatcagggaggtctttggcccgatcttcttcctcatcctcatccgca
gtccctcgttccaggtcctcctcccgtccagggcgttctgccaaccagtcaagagacatc
ttcccaaaagctcgcttcctgccttcccaggtggggcctccagctttctcctttttgatt
ggtgggcgacagatgggccggcgatgccagggacgacgtttccagacaagcttcaccccg
aacccatctgtcagctctcttcctccacgggcttacgcccacaaactaccagttatcggg
agagtgagtaaaccagtgagacgttggacatgctctcattattcactgtatctgcctctt
taa
DBGET
integrated database retrieval system
