Silurus meridionalis (southern catfish): 124388024
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Entry
124388024 CDS
T08004
Symbol
rab22a
Name
(RefSeq) ras-related protein Rab-22A
KO
K07891
Ras-related protein Rab-22
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124388024 (rab22a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124388024 (rab22a)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
smeo04031
]
124388024 (rab22a)
Membrane trafficking [BR:
smeo04131
]
Protein recycling
Rab GTPases and associated proteins
Rab GTPases
124388024 (rab22a)
GTP-binding proteins [BR:
smeo04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
124388024 (rab22a)
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Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
RsgA_GTPase
MMR_HSR1
Gtr1_RagA
AAA_7
GKRP_SIS_N
DUF87
AAA_16
Motif
Other DBs
NCBI-GeneID:
124388024
NCBI-ProteinID:
XP_046708609
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All DBs
Position
1:8609014..8626321
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AA seq
195 aa
AA seq
DB search
MSLRELKVCLLGDTGVGKSSIVCRFVEDNFDPNINPTIGASFMTKTVQYQNEHHKFLIWD
TAGQERFRALAPMYYRGSAAAIIVYDITKEESFLTLKNWVKELHQHGPPNIVVAIAGNKC
DLTDSREVPEKDAKDYADSIHAIFVETSAKNAININEIFTEISQKIPLLVTSDSGLKGLK
LRRDQSDLTRERACC
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcagagagttgaaagtgtgcttgcttggggacactggggttggaaagtcaagc
attgtgtgcaggtttgtagaggataactttgatcccaacattaatcctacaattggtgca
tcatttatgacgaagacagtacaataccaaaatgagcaccataagtttcttatttgggac
acagcaggacaagaaaggtttcgtgcccttgcccctatgtactacagaggctcagctgca
gctatcattgtttatgacattacaaaagaggagtcctttctaactttgaagaactgggta
aaggaacttcaccagcatggaccccccaacatagtggtggccattgctggcaacaaatgt
gatctcacagattccagggaggtaccagagaaggatgccaaggactatgctgactcaatc
catgcaatttttgttgaaactagtgccaaaaatgctattaacatcaatgaaatcttcact
gagataagccagaaaattccacttttagtaacgagtgactccgggctgaagggcttgaaa
ctgcgacgtgatcaatcagacttaaccagggaacgtgcttgctgctaa
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