Silurus meridionalis (southern catfish): 124388031
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Entry
124388031 CDS
T08004
Symbol
coro1b
Name
(RefSeq) coronin-1B
KO
K13886
coronin-1B/1C/6
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smeo04812
]
124388031 (coro1b)
Cytoskeleton proteins [BR:
smeo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
124388031 (coro1b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1899
WD40
WD40_4
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_EML
EIF3I
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
124388031
NCBI-ProteinID:
XP_046708612
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Position
6:complement(12538409..12549235)
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AA seq
499 aa
AA seq
DB search
MSFRRGVVRQSKFRHVFAQAWKAEQCVDDIRVTRVTWDGQLCVANPKFIAVITEAGGGGA
FLVLPLTKTGRVDQSTPTVCGHAASVLDIQWCPHDDNIIASASEDCTVKIWHIPDGGLTV
PMTEATITLEGHSKRVGILAWHPTALNILLTAGCDNLLCIWDIGTGELVYELSDAHPDQI
YSVCWNREGSVICTTCKDKALRVIDPRRGTILKVREKAHEGTRPMRGVFLADGKILTTGF
SRMSERQLALWDTKDLSEPMAVQEMDTSNGVLLPFYDPDTNMVYLCGKGDCTIRYFEVTN
ESPYIHFLSLYSSKEPQRGAGFLSKRGVDVNKCEIARFYKLHERKIEPISMTVPRKSDLF
QGDLYPDTAGLEPSLLAEDWIAGQDAPPILVSMSGSYNVPASKYNTLRGRPKLLPQSNSA
TSISTTALSTNTAARQTGSERTPLFRREVEGGTDRTRKGDDQLADILTEVRALRALVLAQ
GHRIDALERQLARLDEGEV
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcaggaggggtgtggttaggcaaagtaagttccgacacgtattcgcccaggcg
tggaaggcggagcagtgtgtggatgacatcagagttacccgtgtgacatgggatgggcag
ctctgtgtagcaaaccccaagtttatcgctgttataactgaggctggaggaggcggagcc
tttctcgtattaccactcacaaagaccggtagagtggaccagtccactcccactgtatgc
ggccatgctgcttctgtgctcgatatccagtggtgtccacatgatgacaacataattgcc
agtgcttcagaggactgcacagtgaagatatggcacattccggatggcggcctcacagtg
ccaatgactgaggctacaataactctagagggacacagtaaaagagtgggcattctggcc
tggcaccctactgcactgaacatcttactaactgcaggttgtgataacctattgtgcata
tgggatattggcactggtgagctggtgtatgagctgagtgatgctcatccagatcagatc
tacagtgtgtgctggaacagagaggggagcgtgatctgtactacctgcaaagacaaagcc
ttgcgggttattgaccctcgacgaggcactatacttaaggtgcgggaaaaggctcatgag
ggcaccaggccaatgagaggtgtcttccttgctgatggaaaaatcctgacaaccggattt
agccgcatgagtgagagacagctggctttatgggatacgaaagatctctccgagccaatg
gctgttcaggaaatggacaccagtaatggagttctccttcctttctatgacccagataca
aacatggtgtatctgtgtggaaagggtgactgcaccattcgctactttgaggtgaccaat
gagtctccctacatccacttccttagtctctacagtagcaaggagcctcagcgaggagct
ggtttcctcagcaagagaggagtagatgttaacaagtgtgagattgccaggttttataaa
cttcacgagaggaagattgagcccatttccatgactgtgccaagaaagtcagacctgttc
cagggggatctgtatccagacactgcaggcttagagccctctctactggccgaagactgg
attgcagggcaagatgcaccccccatcttagtctccatgagtggcagctacaacgttcct
gcgtccaaatataacacactgcgcggaagaccgaaactgctacctcagagcaactcggct
actagcatcagcactaccgctctcagcacgaacactgctgccagacagacagggagtgag
aggacaccactatttaggagggaagttgaaggagggacggaccgcacgaggaaaggggac
gatcagctggctgacattctgacagaagttcgtgccctccgagcacttgtgttagctcag
ggtcacaggattgacgcactcgaaaggcaactagcgcgacttgatgaaggcgaagtgtga
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