Silurus meridionalis (southern catfish): 124388055
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Entry
124388055 CDS
T08004
Symbol
arhgef18a
Name
(RefSeq) rho guanine nucleotide exchange factor 18a isoform X1
KO
K21066
A-kinase anchor protein 18
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
124388055 (arhgef18a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124388055 (arhgef18a)
Membrane trafficking [BR:
smeo04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
124388055 (arhgef18a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
PH
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
124388055
NCBI-ProteinID:
XP_046708639
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All DBs
Position
6:complement(5574863..5625058)
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AA seq
902 aa
AA seq
DB search
MFKRGTLPNHSITVRVCVCVCVCVRADVQYSALREDLESDAQNFEAPTWSLAVDQQYVKN
FSKDSVKRQDVIHELIQTEINHVRTLKLMLGVYLRELRDSLLMDESQLERLFPRLERLLN
EHQNFLQRLKNRRTECLETGSDQNYCITNIGDILITQFSGDLRSRLQDSYGVFCSHHTEA
VNFYKDQLQNNKKFQSLIRRIGQLSIVRRLGIPEGILLITQRITKYPVLVERIIKNTEAG
TPEHQDLLNALECIKDTIFTVDMQVHQFEQLREIAAHFDPKSYSTMNNGKIFRKDDLLRN
NRRLLREGVLTWRPQNRSKAVDVLMVLLPDYLLLLQEKDQKHIFASLDGKPAVLPLQKLI
VREAAHSDRAMFLISASDVKAVLYEFQTSTAEERSSWRRQIWDTIETCPHVEEELMENED
VYSDKLREAHDQLCEKDAQIEEILRQKLQIFSEISEENSSTVRHLLLRGAATELLQGELL
INNAIIQAESLQMQLMGEEMFLLPPSGESNIEPQRSSQTLPAFHRMTKNADGFRSKAQRP
NSDPHLRDLYLHQLEISADDEGRSTLPPPQDKSEWIVSADKLIRTLYSLKVLVSQQDSEL
EVLRAAQLERERSSRQRFNSIQDQERQRHLEKLREELLQLQKVHVLQRQDQETWARERQR
HLLDMHNREQELNRRMEECTNKEAGLCAERDVLNRSREEYQQDLERLRDSTRTVEKEKEK
LEQEKIKLRKHKHLTHRGGATHLGGATLPDPAPKLLAPYPSPEDTMRSRSLSAPGVPPER
PPLVPPRKESISITTTIKPDVPIQLLSTTNETMKSSSIQQQIPTKLAISKGKEKNKNKSA
HHRTNSAASIEVSEVSPIKVTGKEGGSLRAMKTVKQHTPLQMFMKKALCSRSVNLLSLRS
SR
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagagaggaactttaccaaaccattctatcactgtgcgtgtgtgtgtgtgtgtg
tgtgtgtgtgtgcgtgcagatgtacagtactcagctctgagagaggatttggagtctgat
gctcagaattttgaagctcctacgtggagtttagctgtagatcagcagtacgtgaagaat
ttctctaaagattcggtaaagagacaagacgtcatccacgagttgatccagacggagata
aaccacgtgcgtacactgaagctcatgcttggtgtgtatctgcgtgagctccgtgactct
ctgctgatggacgagtctcagctggagcgtctgttccctcgtctggagcgtttacttaac
gaacaccagaactttctgcagagactcaagaaccgacgcacagagtgtctggagacagga
agtgaccaaaactactgcatcactaatataggagacatcctcatcactcagttttcaggt
gatctcagaagcaggctgcaggacagttatggggttttctgcagtcatcacacagaggcg
gtgaatttctacaaagaccagctgcagaacaataagaagtttcagagtctgatccgaaga
atcggtcagttgtctatcgtgaggaggctgggaattcctgaggggattctgctcatcaca
caacgcatcaccaagtaccccgtcctggtggagcgcatcatcaaaaatactgaagcgggg
actccggagcaccaggatctgctaaacgctctggagtgcattaaggacaccatcttcacc
gtggacatgcaggtccatcagttcgagcagctgcgggaaattgccgctcactttgatccc
aagtcctacagcacgatgaacaacggcaagatcttccgcaaagacgacctgctacggaac
aacaggaggctgctgagagagggagtgctgacctggagacctcaaaacaggtccaaagcg
gtggacgtcctcatggttctactgcctgattatctgctgctgctgcaggagaaagatcag
aaacacatatttgcttctctggatgggaagcctgctgttcttcctctgcaaaagctgatt
gtgagagaagcagctcacagtgaccgagccatgtttctgatctcagcgtctgatgtaaaa
gccgttctgtacgagttccaaacgtcaacagctgaagagagaagcagctggagacggcag
atctgggacactatagagacatgtccacatgtggaggaggagctcatggagaatgaagac
gtttattctgataaactcagagaagctcatgaccagctgtgtgaaaaagacgctcagatt
gaggagatcctcaggcagaagcttcaaatattttctgaaatctcagaggagaactcgagt
acagtgagacacctgctgctgagaggggctgctactgagctcctgcagggggagctgctg
attaacaacgccatcatacaggctgagagtttacagatgcagttgatgggtgaagagatg
ttcttacttcctccatctggagagagcaacatcgagccacaaagatcatcacagactcta
cctgcctttcacaggatgaccaaaaatgctgatggatttcggtccaaagctcagagacca
aactcagatcctcatctccgagatctttacctccatcaactggagatatcagctgatgat
gaaggtcgctccactcttcctcctccccaggataaatccgagtggatagtcagtgcagat
aaactgatacggacgctgtacagtctgaaggtgctggtctctcagcaggacagtgagttg
gaggttctgcgtgcagctcagttggagcgtgagcgttcgtcacgtcagcgttttaactca
attcaggatcaggagcgccagcgccacctggagaagctgcgtgaggaactcctccagctg
caaaaggtacatgtgctgcagcggcaggaccaggagacgtgggctcgcgagcgtcagcgc
caccttctggacatgcacaatcgcgagcaggagctgaaccgccgcatggaggagtgtacc
aacaaggaggcggggctttgtgcagagagggacgtcctgaaccggagcagggaggagtac
cagcaggacctcgagcgcctgagggacagcactcgcaccgtggagaaagagaaggagaaa
ctggagcaggagaagattaagctcagaaaacacaagcacctcacacaccggggcggagcc
acacacctgggtggagcaacactcccggatcctgcaccaaaactgctcgctccatatcca
tcacctgaggacacaatgcgcagcagatctctctcagcacctggtgtgcctccagagcgc
cctccgctggttcctcctcgcaaagagagcatcagcatcaccaccactattaaaccagat
gttcccatccagctgctaagcaccaccaatgagactatgaaatccagcagcatccagcag
cagatcccaactaaactagccattagcaaagggaaggagaagaacaagaacaagagcgca
catcatcgcaccaacagtgcagcctctatagaagtttctgaagtttctcccattaaagtg
acaggaaaagaaggaggaagtttaagagcaatgaaaactgtaaagcaacacacaccactc
cagatgtttatgaagaaggctctctgctctcgaagcgtaaatctgctcagcctccgaagc
agcagatga
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