Silurus meridionalis (southern catfish): 124388067
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Entry
124388067 CDS
T08004
Symbol
slitrk3b
Name
(RefSeq) SLIT and NTRK-like protein 3
KO
K25834
SLIT and NTRK-like protein 3
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124388067 (slitrk3b)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_9
LRR_14
LRRNT
Motif
Other DBs
NCBI-GeneID:
124388067
NCBI-ProteinID:
XP_046708658
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Position
6:5470815..5478062
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AA seq
857 aa
AA seq
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MSSTFGATMLWVVLLSSLSIALVRTTPIPLLDESEEIDEPCFHPCYCEVKEGLFHVHCDG
KGFTNISQVAQSWIRPFKLYLQKNNLRKLYFNNFLHLNNAIGVNLGNNALQDIQAGAFNG
LSSLKRLYLHENKLEVFRNDTFLGLESLEYLQADYNVIRRIESGAFRHLNKLRVLILNDN
LIPALPPFLFRSISLTHLDLRGNRLKTMSYRGTLEYIGRNLMEIQLEENPWNCACDIVQL
RAWLERIPYTSVVGEITCEYPFHLHGKDLREIKQRELCPTLTDAEVEANLGIPHSAGRAR
PTKPSSMFSANQNTASSVEQKNLKPTRRPRPSKTPPTPRSIYPNHPPIAGYETRPPIPII
CPIGCTCNLHINDLGLTVNCKENGFHNVSELTPRPLNAKKLYLSGNLIQKIHRSDFWNFS
SLDLLHLGNNQIFYVQDGAFGNLPNLRSLYLNGNNIEKLTADMFHGLQNLHYVYFEYNEI
KEVQPAAFSSMPALQLLFLNNNLLHSLPVGAFEGTSLARLNLRNNYFPHLPVGGVLEHLH
AVVQIDLNQNPWDCACEIVPLKQWLDTLSSVVIVGEVLCKTPDAMLGKDLRSLSPEAICP
ELLKSSSSPDEKEMEFMPSFPPKAVIPLSVLVLSLVVLFVSSFFAAAALCTFIMKKRDKL
PFRKQEEGGLTGIQMECGIFTETPPTLPETPPSNHVYECISVPASQCAAYERGREGAGAL
GLRKEEAGPLESKLDGTDCSESSANYRTVLEKEEEWTTIVSHAPINTVTDIAGFHGNGIL
CPTVIDSQGPTPKVGLVHSLFGASSWLGDISPKQAVGMDAEARTDRANQTPSNYANLSAR
LKTKMDYAEALERSYQF
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccacattcggagcaacgatgctgtgggtggtcctgctgagcagcctcagcatc
gctctcgtccggacgactcccatccctctgctggatgaatcggaggaaatcgacgaacct
tgttttcatccctgctactgcgaggtgaaagagggtctgttccacgtccactgcgatggc
aaaggtttcactaacatcagccaggtagctcaatcctggatcagaccttttaagttgtac
ctgcagaagaacaacctgcgcaagctttactttaacaacttcctgcacctgaacaacgcc
ataggcgtgaacctgggcaataacgcactgcaggatatccaagcgggtgcatttaatgga
ctgagctcgctgaagagactgtacctacatgagaacaagctggaagtgttccgcaatgac
acgttccttggcctggagagcctggaatacctgcaggctgactacaatgtcatcaggcgg
atagagagtggagcgtttagacacctcaacaaactccgggtgctgatcctcaacgacaac
ctgatacctgcgttaccgccttttctcttcagatcgatctctcttacacacctggacctc
agaggaaatcgcctgaagactatgagctaccgaggaacgctggagtacatcgggagaaac
ctgatggagatccagttggaggagaacccatggaactgtgcatgtgatatcgtccagctg
cgggcctggctggaaagaataccatacacgtctgtggtgggagagatcacgtgcgagtat
cctttccatctgcatggtaaagatctcagagagatcaaacagcgcgagctctgcccgaca
ctgacggacgcagaagttgaggccaatctaggaatccctcattcagcaggaagagcaaga
cccacaaaaccctcatcaatgttctctgcaaaccagaacacggcatcgtctgtggaacag
aagaacctgaaaccaacgcgaaggccgagaccctcgaaaaccccacccactccacgcagt
atttatccaaaccatcctccaattgctggatacgagacgaggccacccattcctatcatc
tgccccattgggtgcacctgcaacttgcacatcaatgacctcggtctgaccgtaaactgc
aaggagaacggatttcacaacgtttcggagctaacgccacggccgcttaatgcaaagaag
ctctacctgagcgggaatctgatccagaaaatacacaggtctgacttttggaatttttcc
agtctggatttgttacacttgggaaataaccaaatattttacgtccaggacggtgctttt
ggaaatttacccaatttacgcagcctgtatctaaacggaaataacatcgagaagctaacg
gcggacatgtttcacggcctgcagaatctccactacgtgtattttgagtataacgagata
aaggaagttcagccggcggcgtttagctctatgcctgcacttcagcttttgtttctgaat
aacaaccttctacattcgcttcctgtaggcgcattcgagggaacttcgctcgctcggctc
aacctgcgcaacaattacttccctcacctgccagtgggcggggttttagagcacctgcac
gctgtggtgcagatcgacctgaatcagaacccctgggattgtgcatgtgagatcgttccg
ctgaaacagtggttggatacgctaagctctgtggtgattgtgggcgaggtgctgtgtaag
acgccagatgccatgttgggaaaggatctgcgctctttgagcccggaggcgatttgcccc
gagcttttaaaatcgtcctcgtctccagatgaaaaagaaatggagtttatgccttcgttc
ccccctaaagctgtcattcctctttctgtgctcgtcctcagccttgtcgttcttttcgtt
tcctcgttctttgctgctgcggcgctttgcacgtttattatgaaaaaacgtgacaagctt
ccatttaggaagcaggaagagggggggctaacaggaattcaaatggagtgtggaatattt
acagaaactccgccgacccttcctgaaaccccgccctctaaccatgtctacgaatgcatc
tctgtaccagcttctcaatgtgcagcttatgagcgggggcgagagggggcaggggcttta
gggcttcgcaaggaggaagcggggcctttagaaagcaagctggatgggacagattgtagc
gagagcagtgccaattacagaacggtgcttgagaaagaggaggagtggacaactatagtc
agccacgcccccatcaacaccgtgacggatatcgccggtttccatgggaacggtatcctc
tgcccgacagtgatcgacagccaagggccgactcccaaagtgggattggtgcacagcctt
ttcggggcgagctcctggttgggcgacataagtccaaagcaagcggtcggcatggacgca
gaggcgaggacagaccgtgctaatcaaaccccgagcaattacgccaacctcagcgccaga
ctaaaaaccaaaatggattatgctgaggcgttggagaggtcatatcagttttag
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