Silurus meridionalis (southern catfish): 124388363
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Entry
124388363 CDS
T08004
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smeo01002
]
124388363
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124388363
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124388363
Peptidases and inhibitors [BR:
smeo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
124388363
Ubiquitin system [BR:
smeo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124388363
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
124388363
NCBI-ProteinID:
XP_046708867
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All DBs
Position
7:complement(10569011..10578550)
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AA seq
1129 aa
AA seq
DB search
MKIVDTALENSDFKSAQRSPLSPVRSEEVNGTSVGWSVDTSNVELSRTMATCVASSCDVA
SYGGNKAFPADRPNEQVALNSGDGINLPQKILFPSERLSMKWTQVHHIGAGLQNLGNTCF
LNSALQCLSYTAPFANYMLSREHSKTCHESEFCMLCTMQNHITLVFANSGNAIKPIGVLH
ELKRIAKHFRYGNQEDAHEFLRYTVDAMQKSCLPTNKLDRYTQATTLIHQIFGGYLRSRV
KCRNCKAVSDTFDPFLDIALDIKNAPSINKALEQFVKPEQLDWENAYRCSSCKEMVQASK
RLTIHRNSNVLTISLKRFANFNGGKISKDVRYNEYFDLRPYMSQSRGDPQIYGLYAVLVH
SGFSCYEGHYYCYVKASNGQWYEMNDSSVTPTDIRSVLDQQAYLLFYIKQGTTDLKNGDF
NHKGFTPSHSSPRPVVKQRLNGHSCTSSPIIGPQLPHMLKNNSYVNGNGSSKEHNNGLEP
SSSGISEGNTSDLSSYSSTTSSSDSDHPVQPRIKMSFIVANGKVVRCNRTLSSASTSSSH
SSPFTAGHQHFHPSSSTSKCQRSKQVNGTSSYCTATFLVPYDEKSCHESGLESKFSDSST
FKPHAVAKTASENGGMHSPLSHNSSSLSPCRNPTDSQRSNSLSESYTGANGSGHRHVNGH
HKVNGLKHPEKTSDSPASASSITDSDSQRVSNCPRSEGLLSPSISTERAKPLTNPLVQRV
SNPAPTLGTDIQALSKPAEVMPKTQATLTEASSKEKATKESAVSNHNLTQQKNDNPPSQR
SPKMANICKQTNGKDNMKMCQSGKPSSFERKRPAERQEHYRYLTPTKDKDGDKKSSRNCK
ERYGHSHRSEKEYYPPRKRFRDSSRDKEAAQYRDKYADRHRDCHYKRGREECSWDREWDR
IYQTSHRSSSHYHREPDSRHARKDHCDKWHYSGEQSSKRAKISSPRSTISTFSPLEQGTR
KHSMSGDDRTSEEHLKRSKKKNKDRHRSFGSDLEYDKNRSGSSSRHRKKKKKRRRHEVEE
RSHRESPSTHNSDKRDRKGRKGEGRSHKQQPSLERGDSPHHTKQSGAENHHQLNSHSGNC
INHYSGYVQGFCGKEIDVQVKYGDLNRTSNSKMFFCGGKTGDSGPVPCR
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagttgacaccgctttggagaactctgactttaagtcagctcagcgcagtccc
ctgtctcctgtccgctctgaggaagtgaacggcaccagcgtcggctggagtgtcgacact
tccaacgttgagctttccaggaccatggctacctgtgtggcttccagctgtgatgttgct
tcttatggaggcaacaaagcatttcctgctgataggccaaatgaacaagtggccttaaac
agtggcgatggcatcaatctgccacagaagatcctgttcccatcagagcgtctcagcatg
aaatggacccaagtgcaccatattggagcaggtcttcaaaacctgggcaacacatgtttt
ctgaattcagctcttcagtgtctttcttacactgcaccctttgccaactacatgttgtca
agagagcattccaaaacatgtcatgaatctgagttttgcatgctgtgtacgatgcaaaat
cacattaccctggtgtttgctaattctgggaatgccattaaacccattggcgtgctgcat
gaactaaaacggattgcaaagcatttccggtatggaaatcaagaagatgcccatgagttc
ttgcggtacacagtggatgctatgcaaaagtcctgcctgcctactaataaattggacagg
tatacgcaggccactactctgatccatcagatatttggaggatatctgaggtctagagta
aagtgtcggaactgtaaagccgtatcggatacatttgatccttttttggatattgcactg
gacattaagaatgcaccatctattaacaaggctcttgagcagtttgtgaagcctgagcag
ttggattgggagaatgcgtacaggtgcagcagttgtaaagaaatggttcaagcgtccaaa
agattaaccattcaccgcaactccaacgtgctcaccatctctctgaaacgctttgccaac
ttcaatggaggcaaaatctccaaggatgtgagatataatgaatattttgacttgcggccc
tacatgtctcagtctcgtggagatccgcagatttacgggctgtatgctgtcctggttcac
tcaggcttcagctgctatgaaggacactactactgctatgtaaaggcaagtaatggccag
tggtatgagatgaacgattcatcggtgactcccactgatattcgttctgtgctggaccaa
caagcatacctgctgttctacatcaagcaagggacaacagatctgaaaaatggagatttt
aaccacaagggttttactccaagccactcatctccccggccagtagtaaaacagaggcta
aatgggcattcttgtacctcctcacctataattggcccacagctccctcacatgctaaag
aataattcatatgtgaatggcaatggctcctcgaaggaacataacaatggcttagagccc
agcagcagtggcattagtgaagggaacacctccgatttgtcttcctattcctccacaact
tcatcctccgattctgatcatcccgtccaacccaggatcaaaatgagctttattgttgcc
aatggaaaggtggtacggtgcaaccggaccttatcgtctgcatcaacatccagcagtcat
tcgtctccattcacagctggtcatcagcattttcacccttcatcttctacctcaaaatgc
cagcgctccaagcaggtcaatggcacatcctcatactgcactgctactttcctggttcct
tatgatgagaaatcatgtcatgagtctggcctggagagcaaattctcggacagtagcacg
tttaagcctcatgctgttgccaagacagccagtgagaacggtggcatgcacagccctctt
tctcataattcaagctcactttcaccctgcagaaatccaacagactctcagagatccaac
agcctctcagagtcttacacaggtgcaaatggttcaggacacaggcatgtgaatggccat
cacaaagtcaatggccttaaacatcccgaaaagacttcagacagtcctgcctctgcttct
tccataactgactctgattcgcagcgtgtgtcaaactgtcccagatcagagggccttctt
tccccatcaatcagtacggaaagggctaaaccactcaccaaccctcttgttcagcgtgtc
tcgaacccagcacccacactgggcacagacatccaggcattgtctaagccagcagaggtg
atgcctaaaacacaggcgaccttaacagaggcgtcaagtaaagagaaggccacaaaagag
tctgctgtgagcaatcacaatctcacccagcagaagaatgataatcctccatcacagaga
agtcccaagatggcaaatatctgtaaacaaacaaatggcaaagacaacatgaaaatgtgt
cagtctggcaaacccagttcttttgaacggaaaagaccggctgagcgccaagagcattac
cgatatttgactcctacaaaggacaaggatggagacaaaaagagcagtcgaaactgcaaa
gagcgttatggacacagccatcggtcagaaaaagagtattacccacctaggaaacgcttc
cgcgattcctccagagataaagaggcagctcagtaccgggacaaatacgcggaccgtcac
agagactgccactacaaaagagggagagaggagtgttcgtgggatcgggagtgggacagg
atataccagacctcgcaccgctcttcaagccactatcatagagagccagattcgcggcat
gcacgcaaagaccattgtgataagtggcactacagcggagagcagagcagcaaacgagca
aagatctcatctccacgttccaccatctccaccttctcacccctggagcaggggaccaga
aaacacagcatgtcaggtgatgaccgcacatccgaggagcacttaaaaaggtcaaagaag
aaaaataaagatagacacaggagtttcggaagtgatcttgagtatgacaagaaccggagc
ggcagctccagccgacacagaaagaagaaaaagaagaggaggaggcacgaggtggaggaa
agatctcacagagagagtccgtcgacccacaactcagacaagcgcgataggaaaggcagg
aaaggagaggggaggagccataagcagcagcccagtcttgagcgaggcgattctcctcat
cacaccaagcagtcaggcgctgagaaccatcaccagctcaatagtcactctggtaattgt
ataaaccattacagtggatatgtccaaggattctgtggtaaagaaattgatgtgcaggtt
aaatatggagacctgaaccgtacatctaacagcaaaatgttcttctgtggaggcaaaact
ggagattcaggacctgtcccctgcagataa
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