Silurus meridionalis (southern catfish): 124388364
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Entry
124388364 CDS
T08004
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smeo01002
]
124388364
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124388364
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124388364
Peptidases and inhibitors [BR:
smeo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
124388364
Ubiquitin system [BR:
smeo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124388364
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
124388364
NCBI-ProteinID:
XP_046708870
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All DBs
Position
7:complement(10583185..10588228)
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AA seq
880 aa
AA seq
DB search
MVTCVASSCDVASYGGKKAFPAKKPNTQVALNSADGINLPQKILFQSERLSMKWTQVNHI
GAGLQNLGNTCFLNSALQCLSYTAPFANYMLSGEHSKTCHESEFCMLCTMQNHITLVFAN
SGNVIKPIGVLHELKRIAEHFQYGNQEDAHEFLRYTVDAMQKSCLSTDKYIQGTNLIQQI
FGGHLRSRVKCRNCKAVSDTFDPYMDIALDIENAPSINKALEQFVKPEQLDWENAYRCSS
CKEMVKASKRLTIDRNSNVLTISLKRFDFSGVKISKDVSYNEYIDLRPYMSQSRGEPQIY
GLYAVLVHSGFSCYEGHYYCYVKASNGQWYEMNDSSVTPTDIRSVLDQQAYLLFYIKQRT
THLKNGDFTHKGFTAGHSSPRPVVKQRLNGHSCTSSPIIGPQLPHMLKNNSYVNGNGSSK
EHNNGLEPSSSGISEGNTSDLSSYSSTTSSSDSDHPVQPRVKMSFIVANGEVTQCNRTLS
SASTSSSHSSPFTAGHQHFHPSSSTSKCQRSKQVNGTSSYCTATFLFPYDEKSSHESGLD
SKFSDSSTFKSHGVAKTASENGGMHSPLSHNSSSPSPCRNPTDSQRSNSLSESYTGANGS
EHRHVNGHHKVNGFKHSDKTSDSPASASSITDTDSQRVSNCPRSAGLLSPSINTERAKPL
TNPLVQRVSNPAPILGTDIQALSKPAEVMPKTQVTLTEASRKEKAAKDSAVSNHNLTQQK
NDKPPSQRSPKMANICKQTNGKDNMKMRQSGKPSSLKQKRSAERQEHYRYLTPTKDKDGD
KKSSRNGKERYGESHQSEIEYYPPRKRFRDSSRDKEAAQYWDKYTDHHRDCRYKSGGEKY
SWDREWDRRYQTSHRSSSHYHRELDLHHAHKDHCDKWHYS
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggtcacctgtgtggcttccagctgtgatgttgcttcttatggaggcaagaaagcattt
cctgctaaaaagccaaatacacaagtggccttaaacagtgccgatggcatcaatctgcca
cagaagatcctgttccaatcagagcgtctcagcatgaaatggacccaagtgaaccatatt
ggagcaggtcttcaaaacctgggcaacacatgttttctgaattcagctcttcagtgtctt
tcttacactgcaccctttgccaactacatgttgtcaggagagcattccaaaacatgtcat
gaatctgagttttgcatgctgtgtacgatgcaaaatcacattaccctggtgtttgctaat
tctgggaatgtcattaaacccattggcgtgctgcatgaactaaaacggattgcagagcat
ttccagtatggaaatcaagaagatgcccatgagttcttgcggtacacagtggatgctatg
caaaagtcctgcctgtctactgataagtatatacagggcactaatctgatccagcagata
tttggaggacatctgaggtctagagtaaagtgtcggaactgtaaagccgtatcagataca
tttgatccttatatggatattgcactggacattgagaatgcaccatctattaacaaggct
cttgagcagtttgtgaagcctgagcagttggattgggagaatgcgtacaggtgcagcagt
tgtaaggaaatggttaaagcgtccaaaagattaaccatcgaccgcaactccaacgtgctc
accatctccctgaaacgctttgacttcagtggagtcaaaatctccaaggatgtgagctac
aatgagtatattgacttgcggccctacatgtctcagtctcgtggagagccgcagatttac
gggctgtatgctgtactggttcactcaggcttcagctgctatgaaggacactactactgc
tatgtaaaggcaagtaatggccagtggtatgagatgaacgattcatcggtgactcccact
gatattcgttctgtgctggaccaacaagcatacctgctgttctacatcaagcaaaggaca
acacatctgaaaaatggagattttacccacaagggttttactgcaggccactcatctccc
cggccagttgtaaaacagaggctaaatgggcattcttgtacctcctcacctataattggc
ccacagctccctcacatgctaaagaataattcatatgtgaatggcaacggctcctcgaag
gaacataacaatggcttagagccgagcagcagtggcattagtgaagggaacacctccgat
ttgtcttcctattcctccacaacttcatcctccgattctgatcatcccgtccaacccagg
gtcaaaatgagctttattgttgccaatggagaggtgacacagtgcaaccggaccttatca
tctgcatcaacctccagcagtcattcgtctccattcacagctggtcatcagcattttcac
ccttcatcttctacctcaaaatgccagcgctccaagcaggtcaatggcacatcctcatac
tgcactgctactttcctgtttccttatgatgagaaatcatctcatgagtctggcctggat
agcaaattctcggacagcagcacgtttaagtctcatggtgttgccaagacagccagtgag
aacggtggcatgcacagccctctttctcataattcaagctcaccttcaccctgcagaaat
ccaacagactctcagagatccaacagcctctcagagtcttacacaggtgcaaatggttca
gaacacaggcatgtaaatggccatcacaaagtcaacggcttcaaacattctgacaagact
tcagacagtcctgcctctgcttcttccataactgacactgattcccagcgtgtgtcaaac
tgtcccagatcagcgggccttctttccccatcaatcaatacggaaagggctaaaccactc
accaaccctcttgttcagcgtgtctcgaacccagcacccatactgggcacagacatccag
gcattgtctaagccagcagaggtgatgcctaaaacacaggtgaccttaacagaggcgtca
cgtaaagagaaggccgcaaaagattctgctgtgagcaatcacaatctcacccagcagaag
aatgataaacctccatcacagagaagtcccaagatggcaaatatctgtaaacaaacaaat
ggcaaagacaacatgaaaatgcgtcagtctggcaaacccagttctttgaaacagaaaaga
tcggctgagcgccaagagcattaccgatatttgactcctacaaaggacaaggatggagac
aaaaagagcagtcgaaacggcaaagagcgttatggagagagccatcagtcagaaatagag
tattacccacctaggaaacgcttccgcgattcctccagagataaagaggcagctcagtac
tgggacaaatacacggaccatcacagagactgccgctacaaaagcgggggagagaagtat
tcgtgggatcgggagtgggacaggagataccagacctctcaccgctcttcaagccactat
catagagaactagatttgcaccatgcacacaaagaccattgtgataagtggcactacagc
tga
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