KEGG   Silurus meridionalis (southern catfish): 124388380
Entry
124388380         CDS       T08004                                 
Symbol
rangap1b
Name
(RefSeq) ran GTPase-activating protein 1b
  KO
K14319  Ran GTPase-activating protein 1
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    124388380 (rangap1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smeo03019]
    124388380 (rangap1b)
Messenger RNA biogenesis [BR:smeo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     124388380 (rangap1b)
SSDB
Motif
Pfam: RanGAP1_C LRR_6 LRR_8 CobT
Other DBs
NCBI-GeneID: 124388380
NCBI-ProteinID: XP_046708894
LinkDB
Position
7:11576315..11581955
AA seq 565 aa
MASEDIDQLTEALAKTHVGEELSYKGQGLKLNDAQSVENIVQEMEQFQNMKALRLEGNTV
GVEAAKAISKALETKKDLQRCYWSDMFTGRVRSEIPSALKSLGSALMMSGARLTELDLSD
NAFGPDGVKGIEALLKSPVCYTLQELRLNNCGMGIGGGTILASALTECYKSSHAAGSPLK
LKVFVAGRNRLENDGTIALSRAFKLVGSLEEIHMPQNGINHPGITALATAVQHNPNLRVL
NLNDNTFTKRGAVAMAQALRHLSKVQVINFGDCLVRSEGAIAITAALKGLPVLKELNLSF
GEIYEAAALVVARAIRDKADMEKLDLNGNCLGEDGCEALKEVMENMGMGDVLGSLSDDEG
EDEDDEDGEEVDEDGEEDTEEKDDDEQNCFNGFKNKESPSKVLLDSSDLLTFLQSPTSEK
LLNLGAKRVQLFEQQVDISNATDIADIFLQLASVYKEDPEVKQVVLESADALLKKVLASP
QFQSYTFTLSLLVKLGLLKGEEKASKVCLLPGHLLTLTHCVEQDYFPLDQANILEIFVSR
NGKLLASCPSAIGDFKATLKKRISA
NT seq 1698 nt   +upstreamnt  +downstreamnt
atggcttcagaagacatagatcagcttacagaggctctggccaagacccatgttggagaa
gagctcagctacaagggtcagggcctaaaactaaacgatgctcagtctgtggaaaatata
gtgcaggagatggaacagttccagaacatgaaggcattgcggcttgagggaaacactgtt
ggtgttgaagcggcaaaggccatctcaaaggctctcgagaccaaaaaggatctgcagcga
tgctactggagtgacatgtttacgggtcgtgttcgctctgaaattccatctgccctgaaa
tcactgggcagtgccttgatgatgtcaggggccaggcttactgaactggacttgagtgac
aatgcatttggacccgatggagtaaagggcattgaggccctcctcaagagtccggtttgc
tatacactgcaggaactcaggctgaataactgtggcatgggcattggaggaggcactatc
ttggcctctgcactgactgaatgctacaagtcatcacatgctgctggctcacctttaaag
ctaaaagtctttgtagcaggacgtaatagactcgagaacgatggcacaattgcactttcc
cgagcatttaagttagttggaagcctggaggagatacacatgccacagaatgggatcaac
cacccagggattacagctttagccactgcagtgcaacacaatcccaatctgcgtgttctt
aatcttaatgacaatacgtttaccaagagaggtgcagtagccatggcccaggccctcagg
catttgagcaaagttcaagtcataaactttggagattgtctggtgcgctctgaaggtgct
attgctataacagcagcactaaaaggactacctgttcttaaggagctgaatctatcattt
ggagagatttacgaagctgcagctctggttgttgccagggctatacgggacaaagcagat
atggagaaactagacctcaatggaaactgcctgggggaagatggctgtgaagctctcaaa
gaggttatggaaaatatgggcatgggggatgtgctcggttcgctcagtgatgatgaaggg
gaagatgaagacgacgaagatggtgaagaggtagatgaagatggtgaagaggatacagag
gaaaaggatgatgatgagcagaactgttttaatgggtttaaaaataaagaaagcccatca
aaggttttattagacagttctgacctcttgaccttccttcagtccccaacgtcagagaaa
ctacttaaccttggtgccaagagagttcagctttttgagcaacaagtggatatttcaaat
gctactgatattgcagacatttttcttcagttagcctcagtgtataaagaagatccagaa
gtgaagcaagttgttttagagagtgctgatgctttgttgaagaaggtgttggccagccct
cagtttcagtcctatacttttaccttgtcattgttggtgaaactggggcttttaaagggt
gaggagaaggccagtaaagtgtgtctcttgcctggtcacctacttactctgacgcactgt
gttgagcaggactacttccctttggaccaggccaatattctagagatctttgtctctcga
aatggcaaacttttagcgtcatgtcccagtgcaatcggtgactttaaagctacactgaag
aaaaggatctctgcctag

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