Silurus meridionalis (southern catfish): 124388380
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Entry
124388380 CDS
T08004
Symbol
rangap1b
Name
(RefSeq) ran GTPase-activating protein 1b
KO
K14319
Ran GTPase-activating protein 1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124388380 (rangap1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124388380 (rangap1b)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
124388380 (rangap1b)
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Gene cluster
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
LRR_8
CobT
Motif
Other DBs
NCBI-GeneID:
124388380
NCBI-ProteinID:
XP_046708894
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Position
7:11576315..11581955
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AA seq
565 aa
AA seq
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MASEDIDQLTEALAKTHVGEELSYKGQGLKLNDAQSVENIVQEMEQFQNMKALRLEGNTV
GVEAAKAISKALETKKDLQRCYWSDMFTGRVRSEIPSALKSLGSALMMSGARLTELDLSD
NAFGPDGVKGIEALLKSPVCYTLQELRLNNCGMGIGGGTILASALTECYKSSHAAGSPLK
LKVFVAGRNRLENDGTIALSRAFKLVGSLEEIHMPQNGINHPGITALATAVQHNPNLRVL
NLNDNTFTKRGAVAMAQALRHLSKVQVINFGDCLVRSEGAIAITAALKGLPVLKELNLSF
GEIYEAAALVVARAIRDKADMEKLDLNGNCLGEDGCEALKEVMENMGMGDVLGSLSDDEG
EDEDDEDGEEVDEDGEEDTEEKDDDEQNCFNGFKNKESPSKVLLDSSDLLTFLQSPTSEK
LLNLGAKRVQLFEQQVDISNATDIADIFLQLASVYKEDPEVKQVVLESADALLKKVLASP
QFQSYTFTLSLLVKLGLLKGEEKASKVCLLPGHLLTLTHCVEQDYFPLDQANILEIFVSR
NGKLLASCPSAIGDFKATLKKRISA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagaagacatagatcagcttacagaggctctggccaagacccatgttggagaa
gagctcagctacaagggtcagggcctaaaactaaacgatgctcagtctgtggaaaatata
gtgcaggagatggaacagttccagaacatgaaggcattgcggcttgagggaaacactgtt
ggtgttgaagcggcaaaggccatctcaaaggctctcgagaccaaaaaggatctgcagcga
tgctactggagtgacatgtttacgggtcgtgttcgctctgaaattccatctgccctgaaa
tcactgggcagtgccttgatgatgtcaggggccaggcttactgaactggacttgagtgac
aatgcatttggacccgatggagtaaagggcattgaggccctcctcaagagtccggtttgc
tatacactgcaggaactcaggctgaataactgtggcatgggcattggaggaggcactatc
ttggcctctgcactgactgaatgctacaagtcatcacatgctgctggctcacctttaaag
ctaaaagtctttgtagcaggacgtaatagactcgagaacgatggcacaattgcactttcc
cgagcatttaagttagttggaagcctggaggagatacacatgccacagaatgggatcaac
cacccagggattacagctttagccactgcagtgcaacacaatcccaatctgcgtgttctt
aatcttaatgacaatacgtttaccaagagaggtgcagtagccatggcccaggccctcagg
catttgagcaaagttcaagtcataaactttggagattgtctggtgcgctctgaaggtgct
attgctataacagcagcactaaaaggactacctgttcttaaggagctgaatctatcattt
ggagagatttacgaagctgcagctctggttgttgccagggctatacgggacaaagcagat
atggagaaactagacctcaatggaaactgcctgggggaagatggctgtgaagctctcaaa
gaggttatggaaaatatgggcatgggggatgtgctcggttcgctcagtgatgatgaaggg
gaagatgaagacgacgaagatggtgaagaggtagatgaagatggtgaagaggatacagag
gaaaaggatgatgatgagcagaactgttttaatgggtttaaaaataaagaaagcccatca
aaggttttattagacagttctgacctcttgaccttccttcagtccccaacgtcagagaaa
ctacttaaccttggtgccaagagagttcagctttttgagcaacaagtggatatttcaaat
gctactgatattgcagacatttttcttcagttagcctcagtgtataaagaagatccagaa
gtgaagcaagttgttttagagagtgctgatgctttgttgaagaaggtgttggccagccct
cagtttcagtcctatacttttaccttgtcattgttggtgaaactggggcttttaaagggt
gaggagaaggccagtaaagtgtgtctcttgcctggtcacctacttactctgacgcactgt
gttgagcaggactacttccctttggaccaggccaatattctagagatctttgtctctcga
aatggcaaacttttagcgtcatgtcccagtgcaatcggtgactttaaagctacactgaag
aaaaggatctctgcctag
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