Silurus meridionalis (southern catfish): 124388431
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Entry
124388431 CDS
T08004
Symbol
dhx32a
Name
(RefSeq) DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 32a
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smeo03041
]
124388431 (dhx32a)
Enzymes [BR:
smeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
124388431 (dhx32a)
Spliceosome [BR:
smeo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
124388431 (dhx32a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
nSTAND3
Motif
Other DBs
NCBI-GeneID:
124388431
NCBI-ProteinID:
XP_046708994
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All DBs
Position
7:20406021..20416119
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AA seq
736 aa
AA seq
DB search
MAHNTSGFSDGESVDIDDSSSLKGLEEVGEDFGFGDDLELNQFDGLPFSSRYYNLLKERH
QLPIWESKQEFLNVLETSQVVIISGTTKSGKSTQVPQWCAEFCLSAQYQHGVVVCSQIQR
QQAIDLALHVSDEMDVNIGHEVGYSIPLENCCFSDTILRYCTDDVLLRELMSDPFLEHYG
VVVIDQAHERTVSTDLLMALLREVLLQRSELRVVLLSVMPASHMLLAHFSGAAHLQVDAP
CSAEVLHSSRGSTESFSAALRLVLEVHRTKEPGDVAVFLASEQEVSCACSLLAKKASRLS
SNLGELVPVAVCSGHAGICPPITQHPQRGRKVFLSCSKSEDMFWSVDTVSFVIDTGVEKR
FVYNPRLRASSEVIRPISRCRAEIRKQLAGSAGKCFRLYPEETELCAEIPAQILEANITS
AVLFLKRMEVAGIRHCDFISRPDPEGFMQALEELDYLAALDDDGNLSEIGIIMSEFPLDP
QMSKALLASCEFDCASEVLTIAAMLSAPSCFLEPPAGKETEAMLCHMKLYHPEGDHFTLI
NIYNTYKCSQREPYFTQGKWCQDYFLCCAALQTADSIRAELTDILKRLELPISESAFGTK
TNTLNVKRALLAGFFMQVARDVDGSGNYFMLSNKHVAHLHHLSAYGAKAHKLGLPEWVLF
HEFTLSNSNCIQTVTQISPKAFIQMAPQYFFYNLPSSECKELLEHILDTEVAEIHPVTTD
TPKAQESQSYDRCVIQ
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacaacactagcggcttttccgatggagaaagtgtggatattgatgactcgagt
tctctaaagggtttagaagaggttggtgaggatttcggttttggagatgatctggagttg
aaccagtttgatggccttcccttctcctcccggtattataatcttctgaaggagagacac
cagctcccaatctgggaatcaaaacaggagtttctaaatgttttggaaaccagtcaggtc
gtcattatctcgggtacaacaaaaagtgggaagagtacacaggttccacagtggtgtgca
gagttctgtctgtcagcgcagtaccagcatggagttgtggtgtgtagtcagattcagaga
cagcaggctattgatttggccctgcacgtatctgatgagatggatgtcaatattggtcat
gaggtaggctacagcattccactggagaactgctgcttctctgacactattctcaggtac
tgcaccgatgatgtgctgctgagggagctgatgtccgacccatttctggagcattacggt
gtggttgtgatcgatcaggcccacgagcgcaccgtgagcactgaccttttaatggccctg
cttcgggaggtgctcctgcagcggtcagagcttcgggtagtgttgctgtccgtcatgcca
gcctcacacatgctccttgcacactttagcggtgcagctcacctgcaagtggacgcaccg
tgctcagctgaagttctccacagcagccgaggcagtacagaaagcttcagtgcagcactg
agacttgtcctggaggtgcacaggaccaaagagcccggggatgtagctgtgttcctcgcc
tcagagcaggaggtcagctgtgcctgtagtcttctggctaaaaaagcatccaggttaagc
agtaatcttggagagctggtgccagtggcagtgtgctcaggccatgctggaatctgccca
cctattacacagcacccccagagaggcaggaaggtctttttgtcctgcagtaaatccgaa
gacatgttttggtcagtggatactgtcagttttgtgattgacactggagttgagaagaga
tttgtatataacccacggctaagagctagctctgaggtgatcagacccatcagtagatgt
cgggcagagattcgtaaacagctggctggatcagcagggaagtgtttccgcctttacccc
gaggagacagaactctgtgccgaaattcctgctcagatcctagaagcaaacatcacctcg
gctgtgctcttcctcaagaggatggaggtagctggaatcagacactgcgacttcatcagc
aggccggatcctgaaggatttatgcaagctttagaagagctggattatcttgcagctttg
gatgacgatggaaacctttctgagattgggatcataatgtctgagttccccttagaccct
cagatgtctaaagcattgttagcgtcgtgcgagtttgattgtgccagtgaggtgctgact
attgcagccatgttatcagctccaagctgcttcctagagccccctgctggcaaggaaaca
gaagcgatgctgtgtcacatgaagttgtatcatccagaaggagaccactttaccctgatc
aacatctataacacttataaatgcagccagagagagccatattttacacagggcaagtgg
tgtcaggattacttcttgtgctgtgcagctctccagactgcagacagcataagggccgag
ctgactgacatactgaagaggctggagctcccgatctccgagtcagccttcggcaccaaa
acaaacacacttaatgtcaagcgagctctactggctgggttcttcatgcaggttgctcgt
gatgtggacggctctggaaactattttatgctgagcaataagcacgtagcacatcttcac
catctttcagcttatggggccaaagcgcacaaactcggcctgcctgagtgggtgctgttt
cacgagttcacactctccaacagcaactgcatccaaacagtcacacaaatctcacccaaa
gcgttcatccaaatggcaccacagtatttcttctacaacctgccctctagtgagtgtaag
gagctcttggagcatattttggatactgaggtggctgaaattcatcctgttactacagac
acaccaaaagcacaggagtcccagtcttatgacagatgtgtgatacagtaa
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