Silurus meridionalis (southern catfish): 124388453
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Entry
124388453 CDS
T08004
Symbol
fbxw10
Name
(RefSeq) CMT1A duplicated region transcript 1 protein
KO
K10266
F-box and WD-40 domain protein 10
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124388453 (fbxw10)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
124388453 (fbxw10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_Nup120_160
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
Beta-prop_CAF1B_HIR1
Beta-prop_SPT8
Beta-prop_VPS8
Beta-prop_RIG_2nd
WD40_2
Beta-prop_IP5PC_F
Beta-prop_LRRK2
Beta-prop_Vps41
Beta-prop_IFT140_2nd
F-box-like
Motif
Other DBs
NCBI-GeneID:
124388453
NCBI-ProteinID:
XP_046709023
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Position
7:complement(22910172..22927773)
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AA seq
928 aa
AA seq
DB search
MQHERKRGERRSLSCNPENKFNTPEDSFHYTTKLYNSTQWLLEAEEAAKRRFLTGILVQC
QSQEVLHNVQKVLQVTMGKDFTYARSRVKASDTVGHFKTLIPDVRLLGKEMLDTWEWFKN
STDVTKTNYLFGLLAFCDAEMLHMLGNLACMLIEKHNLHLLQCKTVLPSTEKDSSSVTES
NESFRTSHDLDLLARASSVPHETRDNTESDLLDTKGSGWSVVEEIDWNDVKDPALMVVPI
SSRYMSGICKQRDFIRALPVGLAKRILGLLDKDTLQKCKQVSQHWRYLTEETIAEQSVKK
MVEEQAMILQGIPSVVNPAYARIRKVLVPFRLGEVFMQPKKSFQKSKDIRGFEAVYTKIK
TKVVEMEERNVYCGVYNSLIMLDREDHSRVIHYDGGSKVVLGSRDRLVRLLDMVLLKEVP
PRMYGHAGSVRAVLVCEERELVISASYDLSIRCWNMKTGTCMMLFSGHMGTITCLDLNRN
YLVSGARDCKVKVWNLQTGQCCDRMRFCHRKPVVCVKTDSTLVLSGCEEGLIKMWDMETA
NLLKVTQSHQGSVRCLFLDQFHILSGGSDSKVLAWSTDRQFKKCLMTFQHPREVVTVSSL
FLRVITGCVDGRIRIFNLLSGDCLRVIKIGTDESPIRSLHTHHNTIVVNSSSRVLSLQFS
EQQWDYSAPPERIMDHTLPQHKIPAALPSSTKPKKNERRSRTLSLSQRMRNLSAPSMHHL
HEKHYLAQRCLMTPSERAVRERLRKKSPHQSITPTQVFLKVRPRRQPEFKGSPSSAQKAS
KRSHSASKPSSFEGMLKIYTPLKTDMHPSIPSPALLQTLPKSASTHPHTACATTTTTQEP
RISFIKGESKHPSHHVDFETPARSRQIHCPLDPFRESGGFQLRTDTQLEEYNQAQMQANL
YTLPKEGKKRQCRASWRLKVKVAPVKDA
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgcagcatgagaggaaaagaggggaaaggagaagtttgagctgtaacccagagaacaag
tttaatacaccggaggattcctttcactacacaaccaaactctacaactcaacacaatgg
ctcttagaagcggaagaagctgcaaagagaaggttccttacagggattttagtgcagtgc
cagagtcaggaagtcctgcacaacgtccagaaagtgctacaggtgactatggggaaagat
ttcacctatgccaggagtcgcgttaaagccagcgacaccgttggccactttaaaacctta
attccagatgtgcgtttactcggaaaggagatgctagacacctgggaatggtttaagaac
agcacggatgtgacgaaaaccaattatttatttggactcttggctttttgtgatgctgag
atgttgcacatgttggggaacctggcatgtatgctgatcgagaagcacaacctacacctt
ctgcaatgtaaaacagttttgccaagcactgaaaaggacagcagttctgtgactgaatca
aatgaatccttcagaactagtcatgatctggaccttcttgcccgagctagctcagtccct
catgaaacccgagataatactgaatcagaccttctggacaccaaaggatctgggtggagt
gttgtggaggaaatagattggaatgatgtaaaagatccggcactcatggtggtgcctata
tcttccagatacatgtcaggaatttgcaaacagcgagactttattcgagcacttccagtc
ggcctcgccaagaggattttaggcctgttggataaagatacactacagaagtgtaaacaa
gtctcccagcattggcggtacctaaccgaggagaccattgcagagcagagcgtaaaaaag
atggtggaggagcaggccatgattttgcagggaattccttctgtagtcaaccctgcctat
gcaaggatccgcaaggtcctagtgcccttcagattaggggaggtgttcatgcagcctaag
aagagttttcaaaaatctaaggacatcaggggctttgaagcagtctatacaaagattaaa
accaaggttgtggagatggaagaaaggaacgtgtactgtggagtctataacagtttaatc
atgctggacagagaagaccacagcagagtgatccattatgatggaggcagtaaggtggta
ctgggatctagggaccgacttgtgcgtcttcttgacatggtgctgctgaaggaggttccc
ccgcggatgtatggccatgcaggaagtgtgagagcagtgttggtgtgtgaggaaagagag
ttggtgatcagcgccagctatgatctcagcatccgatgctggaacatgaagactggtaca
tgcatgatgctattctctggacacatgggcaccatcacctgcctggacctgaacaggaac
tatctggtctctggagccagagactgcaaagtcaaagtgtggaacctgcagactggtcag
tgctgtgacaggatgaggttttgtcaccgaaagcctgtagtgtgtgtgaagaccgactcg
actctggtgctcagcggctgtgaggaaggactgatcaagatgtgggacatggagacagca
aatcttttaaaggttacccagagtcaccagggctctgtaaggtgtctgttccttgaccag
tttcacatcttgtccggaggatcagacagtaaggtgctggcctggagcacggaccgtcaa
ttcaaaaagtgtcttatgaccttccagcatccacgggaagtggtaacggtgtcttccctc
ttcttgcgagttatcactggctgtgtggacggaaggatccggatctttaacttgctcagc
ggagactgtttgagagtcatcaaaatcggcacagatgaaagccctatacgttctttgcac
acacatcataatactattgtggtgaacagcagcagtcgggttttgtctctgcagttttcc
gagcagcagtgggattacagcgcgccgccggagcggataatggatcacacacttcctcag
cataagatccctgctgctttaccaagctcaactaaaccaaagaaaaatgaaaggagatcc
agaacactgtctctctcccaacggatgaggaacctctcagctcccagcatgcatcactta
catgaaaagcactacctggcccagagatgtttaatgaccccgagtgagagagctgtgcga
gagcgtttgaggaagaaaagccctcatcagtctatcacccccacccaggttttcctaaag
gtccgtccgagacgtcagcctgagttcaaaggatctccttcttcagctcagaaagcatca
aaacggtcacattctgcctccaaaccctcctcatttgaaggcatgctaaaaatatacaca
cccctgaaaaccgacatgcatcccagcatcccatctccagcattactccagactttgcct
aaatctgcatccacacacccccatacggcctgtgccaccaccaccactacccaagaacct
agaatttccttcattaagggtgaatcgaagcatccaagccaccatgttgattttgagact
cctgcgagatctaggcaaatccattgtccactggatccattccgagagagcggaggtttt
cagctcaggacagacacccagctggaggaatacaatcaggcgcagatgcaggctaatttg
tacacactgccaaaggaagggaagaagaggcagtgcagggcatcctggagactgaaagtg
aaagttgctcctgttaaagatgcgtaa
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