Silurus meridionalis (southern catfish): 124388468
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Entry
124388468 CDS
T08004
Symbol
lrit1b
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1b
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
124388468 (lrit1b)
Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
124388468 (lrit1b)
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GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
LRR_1
ig
LRRNT
fn3
Ig_2
LRR_14
Motif
Other DBs
NCBI-GeneID:
124388468
NCBI-ProteinID:
XP_046709078
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All DBs
Position
7:26592963..26597903
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AA seq
639 aa
AA seq
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MWVFLSLCLAFIGGLSVPSSACPAQCSCFFHKLSDGTKARSVLCSDPELSSIPTDFPSDI
SKLRIEKTDITQISSEAFISLRKLEFLWMSFNSLSVLQVDSFRGLSMLNELRLEANFITS
FPWESLTDMQNLRLLDLHDNKISIIPAEAAIYIKNLTYLDLSSNSLTTVPSEVLLMWLSA
KPQQDAENSKMILGLHDNPWQCDCRLFDLIQFQKSPSSALAFIDTHLRCSEPESISGVLF
WDVEIRRCQVPRVHTAVAKVHSVVGNNVLLRCGTVGVPMPELIWTRADGKDINGTVHEEL
SAEGITWSILSILTMSSHDSAKYICRATNFVGSTNAVISLVVSETRQISEVKKSGIKKNG
SFRRAGYQEKPTARYIPTTSAHTEAFNGSKSTRPSKIESSSISNGVMDGKSTENTLEIDV
EKNVLSNLAANASFLQQGPEKRVVRSVKIIGDTDHTVSINWRAPSATNTTWFSVLYAVFG
ERDMKRINVGPGKHRITIEGLVPKTKYIACVCVKGLIPKKEQCVIFSTDEAASASGTQKL
INVVVITVACVIAVPLTLIVCCGALKRRLQKLMGRRKKDIQDSYVTFETITPGNKAKGME
GEFLAHTNKDESNRLLSARSSVDSEAVNKTESHPNEYYC
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtctttttgagtttgtgtttggcctttatcgggggactttcagtcccgtccagc
gcctgtcctgcacagtgtagctgtttcttccacaaactcagtgatggaaccaaagcccgg
agcgtcctgtgcagtgatcctgagctcagctccatccccactgacttcccctcggacatt
tcaaagcttcgtattgaaaagacggacattacccaaatctccagcgaggcctttatctcc
ctccgaaaactcgaattcctctggatgtcctttaactctctttctgttctccaagtggac
agtttccgtggcttgagcatgctgaatgagcttcggctcgaagcgaacttcatcacctcc
ttcccatgggagagtttaactgatatgcagaacctcagactcctggatttgcatgacaat
aagatcagcatcatcccggccgaagcagctatctacattaaaaacctgacgtacctggat
ctttccagtaacagcctcacgactgtgccatctgaagttctgctaatgtggctctctgcc
aaaccgcagcaggatgctgagaactcgaagatgattttgggtcttcatgataacccgtgg
cagtgtgactgtcgcttgttcgacctgattcagttccagaagtctccgtcatcagcgtta
gctttcatcgacactcacctacgctgttcagagcctgagagcatttccggagtactcttc
tgggatgtggagattcgaaggtgccaggttccacgagttcacaccgccgtagctaaagtt
cacagtgtggtaggcaacaacgtcctgctccgctgtggtactgttggagtgcccatgcct
gagctcatctggacccgggctgatgggaaagacatcaatggcacagtccatgaagaactt
tcagccgaaggcatcacctggtccattctcagcatcctcaccatgtcctctcatgactcg
gccaaatacatctgcagagccacaaattttgtgggcagcaccaacgccgtcatctctctt
gttgtttcagaaacaagacagataagtgaggtgaagaaaagtggcatcaagaagaacgga
agctttagacgagcaggatatcaagagaaacccaccgcaagatacattcctacgacctct
gcacatactgaagcatttaatggctccaaatccacaaggccatccaagatcgagagctct
agcatctctaatggagtaatggacggcaaatccacagagaacactttagagatcgatgtg
gaaaaaaatgtgttgagcaacttggcagccaacgcttcgttcctccagcaaggcccggag
aaaagagtggtacgttccgtcaaaataatcggcgacaccgatcacacagtgtcaatcaac
tggcgagctccttctgcaaccaacaccacgtggtttagtgttctttatgccgtattcggt
gaaagagatatgaaacgcatcaatgtcggtcccgggaagcatcgcatcaccatcgagggg
cttgttcccaaaaccaagtatatcgcctgtgtatgtgtgaagggtctaatcccaaagaag
gagcagtgtgtgatcttctcaaccgatgaagcagccagtgcaagtggcactcagaagctc
atcaacgtggtggtaatcacggtagcgtgtgtcattgctgtgcctctcaccctcatcgtt
tgctgcggggctctgaaaagacgactccagaagctcatgggaagaagaaagaaggacatt
caagactcgtatgtaacctttgagactatcacaccaggtaacaaggctaaagggatggaa
ggggagttcctcgctcacaccaacaaagacgagtccaaccgtctgctctcggctcgctcc
agcgtcgactccgaggccgtgaacaaaaccgaaagtcatccgaatgagtattactgctga
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