Silurus meridionalis (southern catfish): 124388475
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Entry
124388475 CDS
T08004
Name
(RefSeq) Usher syndrome type-1G protein homolog
KO
K21878
Usher syndrome type-1G protein
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
smeo03037
]
124388475
Cilium and associated proteins [BR:
smeo03037
]
Primary cilia and associated proteins
USH complex and associated proteins
124388475
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_3
Ank_5
SAM_1
Motif
Other DBs
NCBI-GeneID:
124388475
NCBI-ProteinID:
XP_046709091
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Position
7:27108832..27121245
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AA seq
480 aa
AA seq
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MNNRYHRAARDGHVTLLKEASRKELNTEDEDGMSPVLWAAHHGNLEALRVMLGRGGDPDK
CDIWGNSPLHLAAANGHLDCLSFLVSFGANVWCLDNDFHTPLDLAAVRGHMDAVRYLDSV
AAKQSALNPKLVRKLKQRAFCNAEQRIKHCAELQHQNQRRMEKKFLKETVGSAAAGSVRF
SISDGHKIPQFNTVTSGITYTQATLNSMPKSKTKIPKCLEKKKKKKKQADGTFKISEDGR
KSVRSLSGLQLGNDVLFLKQETYINPRHRLHVRNMFPQNPNDGNDDDDDVVVVSHAVSDP
GLYNEPGEDSLFSRPGLGTLVFRRNYSSDGVQEVDAFGVEGEELWRKENSYFSECERVRL
RHSSLCQDTCSSSARLQDRYSKAFLWDCDDDEDDGDYEVEYDDLHPCSSPLEVFLLSQGL
EEFLSLFMKEQMDLEALMLCSEPNLVIINVPLGPRKKLLEACSRRTHTLQRARAMCDTQL
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacagatatcaccgagcagcacgagacggtcatgtgaccctactgaaggaggcc
agcaggaaagagctgaacactgaggatgaagatgggatgagtccggtgctgtgggcggct
caccacggcaacctggaggctctgagagtgatgctggggcgaggaggcgacccggataag
tgtgatatctggggaaactctcctcttcacctggccgcagccaacggccaccttgactgc
ctttcattcctcgtctcattcggtgcaaacgtgtggtgtcttgataacgacttccacacc
cccctggacctggccgccgtgcgaggacacatggatgccgtacggtatctggactcggtc
gctgccaagcagagcgctcttaaccccaaactggtgaggaagctgaagcagcgagcgttc
tgtaatgcagagcagcgcattaaacactgtgctgaactgcagcaccagaaccagcgacgc
atggagaaaaaattcctgaaggagaccgtgggttcggccgcagccgggtctgtgaggttc
tccatcagcgacggacacaaaatcccacaattcaacactgttacctccggcatcacctac
acacaggccacattaaactccatgccaaaatctaagacaaagatcccaaagtgtctggag
aaaaagaagaagaagaagaagcaggctgatggcacctttaagatctctgaagatggaagg
aaaagtgtgcgctctctatctgggcttcagctggggaacgatgtgttgttcctaaagcag
gagacatacataaatcctcgtcacagacttcatgttcggaacatgttccctcaaaaccca
aatgatggcaatgatgatgatgatgatgtagttgtggtttcacatgcagtaagtgatcca
ggtttatacaatgagccaggagaggactctctgttctcccgccctgggctcgggacactc
gttttccggaggaattacagcagtgatggagttcaggaagttgatgcttttggtgtagaa
ggtgaggagttgtggagaaaagagaattcttacttcagtgagtgtgagcgtgtacgtctc
agacattccagtctgtgtcaggacacctgcagcagctctgcaagacttcaagacagatac
tcaaaggcgtttctgtgggactgcgatgatgatgaagatgatggtgattatgaagtagag
tatgatgacctgcatccttgctcctcccctctggaggtgttcttgttgtctcagggtcta
gaggagttcctgtccctgttcatgaaagagcaaatggatttggaagctctgatgctgtgc
tcggagcctaacttggtcatcatcaatgttccactaggacccaggaaaaagcttctggaa
gcctgcagtcgtcgcacacacactctgcagcgagccagggccatgtgtgatactcagctc
taa
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