Silurus meridionalis (southern catfish): 124388545
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Entry
124388545 CDS
T08004
Name
(RefSeq) cilia- and flagella-associated protein 57-like isoform X1
KO
K24729
cilia- and flagella-associated protein 57
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
smeo03037
]
124388545
Cilium and associated proteins [BR:
smeo03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
124388545
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
WDR55
Beta-prop_HPS5
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Beta-prop_Vps41
NBCH_WD40
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_TEP1_C
WDR90_beta-prop_4th
DUF6364
Motif
Other DBs
NCBI-GeneID:
124388545
NCBI-ProteinID:
XP_046709250
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All DBs
Position
7:complement(10409929..10425678)
Genome browser
AA seq
1160 aa
AA seq
DB search
MIDCIQEIDSAEKDCNENLVQIQPCHIFGVCKTVNNNLLFLDEETLIFSSGKHCIRYHID
KRGAEFIYGSKGRKVIQALALSPDRRYLAVSECDKSGYITILDLQNKKCCKTQVFDGCSI
GAQEFVCLSFSANSKYLLAQAGGPKWNIYYLRWETMELICNVKTTVNGLISQVSFNPEDD
NQICVTGKSVFKLFELKNDSLRLANSYQMENDEVLCHKWMSGDCIIAGTEGGKLLMLKST
HLQVLGKSRERQTKKEHASLFLAEVAPVTAIHRHSNGFACSDAPGLVCLYEKTKDKENYR
KTVEIKIPGDLPLQAIATMCISPKEETLAVTTDRGQMFHVNLTSIKDGESEEAQFEFLSH
SYHTDNITGLSMCTMKSLIATCSTDCTVHIWNYKIKSLEQFKQFDKQPLSVSMFSNGLSI
LVVFSTKICLMNLLYNNIVTVKNFDINNCTECVLNHDCNMFAAVIKNMIHVYNIRTYEKL
DLAGHSETVQSVKWSSDDSHLVSCGLDGAVYIWNILNGNYETKIETNCIYVDLTLFPNTG
NILTVNQSSVQEIQDGKILLEITSDGVAYTAISITHSERAIFIGTAAGTIRIIELPFKND
KSWIEQQAHAVPITKLAVSPCDQFLLTASKDGTLLIWNIIDQGRIKLEIVKELDYTQEVL
CTKEYMEEKLQTIDELTSQVKWLKMQHDCELDLMDVNYNKKMSNIVQNYLQEIKSLKAKI
QMLNTEIEDERVSHQKLVTDLKEKHAQELNDLALDYNMRMTVENEVNCWSVHKAEEIQQE
HKEEQASLVLAIEDIKQGLEHKLHELQANLDQEKKNSEERERRIKDDTESEITQLGQDYE
KDITLEREARLKTSSELEHLKQSILQYTKMKAVIEQQGLLVASAMAEKQMVLDKIRRAKL
TIKELTEEMEKQSTTIDEQEHSINELHVKIKQNKQSMEQTEERLLSVTMESKLLEEGSML
KSKEERNEIERLQNEILERNQMYQGFADEVKHVNRKYNRVIDDLKQKLLSKNTSLLEEKQ
KVKSLEAVVQRTKADIQNCTRFIQEPKKLKENVIELHSLHFHQEVAIGLEAEMKQKHVRN
MEHFSKVLKCQKSRHSREIQNEKTTNTRITNESTFMITQINEQELKNQELITSIRMKDIQ
EAETAAANQNLPGPCQNPTV
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgattgattgtattcaggagatcgattctgctgaaaaggattgtaatgaaaatttagta
cagatccagccctgccacatttttggtgtgtgcaaaacagtaaacaacaacttactcttt
ctggatgaggaaacattgattttctcaagtggaaaacactgtattcgatatcacattgat
aagcgaggggccgagttcatctatggttcaaagggaaggaaagtcattcaagccctggct
ttaagccctgaccggcgctacctggctgtatcagaatgtgataaatcgggctacatcacc
attcttgacttacagaacaagaagtgctgcaagacacaggtttttgatggctgtagcatt
ggtgcacaggagtttgtctgcctgtcattttctgccaactcaaaatatctcctggctcaa
gctggaggacccaaatggaacatttattacttgaggtgggagacaatggagctcatctgt
aatgtgaagaccactgtgaatggtcttatcagccaggtcagctttaatccagaggacgac
aaccagatctgtgtgaccggaaaaagtgttttcaaactttttgagttgaagaatgactcc
ctgagattggccaactcatatcagatggagaacgacgaggtcctgtgccacaaatggatg
tctggggactgtatcatcgctggaactgagggaggaaaactgctaatgttaaagtccacg
cacctgcaggtgctggggaaatcacgtgagagacaaacgaaaaaggagcatgcttcttta
tttctagctgaggtagcacctgttacggccatccaccggcattccaatggctttgcctgt
tcagatgcacccgggttagtttgtctctatgagaaaactaaagataaagagaactacaga
aagactgtggagataaaaattcctggtgatctgccacttcaagcaattgccacaatgtgc
atttctccaaaagaggagactctggccgtcaccacagaccgaggccaaatgttccatgtc
aacctcacctcgatcaaggatggagagagtgaggaagctcagtttgaattcctgtctcac
tcttatcacactgataatatcactggactgtccatgtgcacgatgaaatccctcattgcc
acctgctcaacagactgcaccgtgcacatttggaactacaagatcaaatctctggagcag
tttaaacagtttgataaacagccactctctgtgtcaatgttctcaaatggtttatccatc
ctggtggtgttctccactaaaatctgccttatgaacctgctctataacaacattgtcact
gtcaagaattttgatataaacaattgcactgagtgtgtgctcaatcatgactgcaacatg
ttcgctgctgtcatcaaaaacatgatacatgtctacaatatcagaacatacgagaaactg
gacttggccggccacagtgagacggtgcagtcggtgaagtggagcagtgatgacagccac
ttagtgtcatgtggactggatggtgctgtatacatatggaacatcctgaatggcaactac
gaaactaagatagagactaactgtatctatgtagatttgacactctttcctaacactggg
aacatccttactgtaaaccagtccagtgttcaggagattcaggatggaaagatcctactt
gaaataacttcagatggtgtggcctatacagcaatatctattactcattcagaacgagca
atctttattgggactgccgctggtaccatcagaatcatcgaacttccatttaaaaatgat
aaatcctggatagaacaacaggctcatgctgttcccatcacaaaactggctgtctcacct
tgtgatcagtttctgttgacggcctcaaaggatggcactctcctcatctggaacatcata
gatcagggccgaataaagctggagattgtgaaggaattagattatactcaggaggtcctc
tgcacaaaagaatatatggaggaaaagcttcagacaatagatgagctgacgtcccaagtc
aagtggctgaagatgcagcacgattgcgaactggatttgatggacgtgaactacaataag
aagatgagcaacattgtacagaattaccttcaggagataaagtctcttaaagctaaaatc
cagatgctgaataccgaaatagaggatgagagggtctctcatcagaagttggtgacagat
ttaaaggaaaagcatgcccaagagctgaatgatctagcactggactacaacatgaggatg
actgtggaaaatgaggtgaactgctggtctgtgcataaagcagaggagatacagcaggaa
cacaaggaggagcaggccagcctagtccttgccatagaggacataaaacagggcttggaa
cacaagcttcatgagctacaagccaatttggatcaagagaagaaaaattctgaggagagg
gaaagaaggatcaaggacgacactgaatctgaaattacacaactcggccaggactatgaa
aaagatattacattggaaagggaggccaggctaaagaccagtagtgaactggagcacctg
aagcaaagtatattgcagtacacaaaaatgaaagccgtgatagaacagcagggcttactg
gtcgctagtgcaatggcagaaaagcagatggtgttggacaaaattaggagggcaaaacta
accatcaaggaactgacagaggaaatggagaagcaaagcactactattgatgaacaggaa
cattccatcaacgagttgcacgtaaaaatcaaacagaataagcagagcatggaacagaca
gaggaaagattgctgagtgtgaccatggagagcaaactgctagaagaaggcagtatgctg
aagagcaaagaagagaggaatgaaattgaacgccttcagaatgaaatactggagcggaat
cagatgtaccaagggtttgctgatgaggtgaaacatgtcaataggaagtacaatagggtt
attgatgacctgaaacagaagctattatcaaagaatacatcattgctcgaagagaagcaa
aaggtcaaaagcttagaagctgtagtgcaaaggacgaaggctgacattcagaactgtaca
cgcttcatccaggagccgaagaaactaaaggagaacgtcatcgaactccactcactccat
tttcatcaagaagtggcaatcggactggaggctgaaatgaagcaaaaacatgtccgaaat
atggagcatttcagcaaggtcttaaagtgtcagaaatcaagacactctagggagatccag
aatgagaaaacaacaaacaccaggatcacaaatgagagtaccttcatgataacacagatt
aatgagcaggaactaaagaaccaggaactgatcacgagcatcagaatgaaggatatccaa
gaagccgaaacagcagcagcaaaccagaatttaccaggcccatgtcaaaatcccaccgtt
taa
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