Silurus meridionalis (southern catfish): 124388579
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Entry
124388579 CDS
T08004
Symbol
htra1b
Name
(RefSeq) LOW QUALITY PROTEIN: serine protease HTRA1B
KO
K08784
HtrA serine peptidase 1 [EC:3.4.21.-]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smeo01002
]
124388579 (htra1b)
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
smeo03110
]
124388579 (htra1b)
Peptidases and inhibitors [BR:
smeo01002
]
Serine peptidases
Family S1: chymotrypsin family
124388579 (htra1b)
Chaperones and folding catalysts [BR:
smeo03110
]
Other chaperones and cochaperones
DegP / HtrA
124388579 (htra1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin_2
Trypsin
PDZ_6
IGFBP
PDZ
PDZ_2
Kazal_2
Peptidase_S46
Kazal_1
Peptidase_S32
GRASP55_65
Neuroparsin
DUF6288
LSM
Motif
Other DBs
NCBI-GeneID:
124388579
NCBI-ProteinID:
XP_046709310
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All DBs
Position
7:482911..501562
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AA seq
474 aa
AA seq
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MMARVRFVVCACLLLVIGAPVWCGARVPGCSDHCDKSACPPIPSDCLSGDALDRCDCCPV
CASGEGEQCSAHRDCAEGLRCSVTDGVAYSATVRRRAKSGVCACEXAEPACGSDGVTYRN
VCELRSASGSAQRHNQPPVIVVQRGACGGKGHDGNPDSLRHQYNFIADVVEKIAPAVVHI
ELYRKMVFTKREMAVASGSGFVVSEDGLIVTNAHVVANKHRVKVELKSGATYDAKIKDVD
EKADIALIQIDTPTKLPVLLLGSSADLRPGEFVVAIGSPFSLQNTVTTGIVSTTQRGGKE
LGLRNSDMDYIQTDAIINYGNSGGPLVNLDGEVIGINTLKVTAGISFAIPSDKIRQFLTE
SHDRQAKGKNTTKKKYIGVRMMSLTPTLAKELKQRTSDFPDVTSGAYVIEVIPKTPAEAG
GLQENDIIISINGERITSASDVSTAIKKDASLRTVVRRGNEDVILTVVPEEIDP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgcgtgtgcggttcgtggtgtgcgcgtgtctcctgttggtaatcggcgcgccg
gtgtggtgcggcgcgcgcgtccccggctgctccgaccactgcgacaagtccgcgtgcccg
ccgattccctccgactgcctgtccggggacgcgctcgaccgctgtgactgctgccccgtg
tgcgcgtctggcgagggcgagcagtgcagcgcgcacagggactgcgccgagggcctgcgc
tgctccgtgaccgacggcgtggcctacagcgccaccgtgcgacggcgcgccaagagtggc
gtgtgcgcgtgcgagnncgcagaaccggcgtgcggcagcgacggagtgacctaccggaac
gtgtgcgagctgcgcagcgcgagcgggagcgcgcagcgtcacaaccagccgcctgtcatc
gtcgtgcaaaggggcgcgtgcggcggtaaaggtcacgatgggaatcctgacagcctgcgc
caccagtacaacttcatcgcggacgtggtggagaagatcgctccagctgtggtccacatc
gagctctaccgcaagatggtgttcaccaagagggagatggccgtggctagcggctctggc
tttgtggtgtctgaggacggtctgatcgtcaccaacgctcatgtcgtggccaataagcac
agagtgaaagtggagctgaagtctggagccacgtacgacgcaaaaatcaaagacgtggac
gagaaagctgacatcgccctcatccagatcgacacgcctacgaagcttcccgtgctcctg
ctcggcagctcggctgatctgaggcccggcgagtttgtggtcgccattggaagccccttc
tccctccagaacactgtgacgacgggcatcgtcagcaccacccagcgtggcggtaaggag
cttggcctccgcaactcggacatggactacatccagaccgacgccatcatcaactatggg
aattcaggaggaccactggtgaatctggatggagaggtcatcgggattaacactctgaag
gtgaccgccggaatctccttcgccattccctcagacaagatccgccagttccttaccgaa
tctcacgatcgacaagccaaaggaaaaaacaccacaaagaagaagtatatcggtgtgagg
atgatgagcctcaccccgactcttgctaaggagctgaaacaaaggacgtctgatttcccg
gacgtcacctctggagcctatgtcatcgaggtcattccgaaaactccagcagaagccgga
ggtctgcaggaaaacgacatcatcatcagcattaacggcgagcggatcacgtcagcgagc
gacgtcagcaccgccatcaagaaggacgcatcgctccgcacggtggtccggcgagggaac
gaggacgtcatccttaccgtcgtgcctgaggagatcgacccttga
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