Silurus meridionalis (southern catfish): 124388584
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Entry
124388584 CDS
T08004
Symbol
vps35l
Name
(RefSeq) LOW QUALITY PROTEIN: VPS35 endosomal protein-sorting factor-like
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124388584 (vps35l)
Membrane trafficking [BR:
smeo04131
]
Protein recycling
Others
Retriever complex
124388584 (vps35l)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
124388584
NCBI-ProteinID:
XP_046709322
LinkDB
All DBs
Position
7:complement(530658..540981)
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AA seq
962 aa
AA seq
DB search
MASVQWHSRTRNYGAESRSCRATAVTVQSGDYHPLKPITVTDSKSCRSARKGSTSSSSSS
SGSVIPDPLSSMLEGTDPLSLFAAAGETPALSHSSSSVELARTRGDKEEEVGCDFEPWSA
KRGEILARFTTTEKLSINLFMGSEKSKATSPSSAVSEKVRTRLEELDDLEEVKELLNLSQ
QDYANRIEELNQSLKEAWASDQKVKALKIVIQCSKLLSDTSVILFYPSKFVLITNILDTF
GRLVYERIWSMCSDPAPLPDSFSVDDVNDTAKETCLNWFFKIASIRELIPRLYVEAAILK
CNRFVSKSGIQETLPRLTAMIRGIGDPLVGVYARAYLCRVGMEVAPHLKDSLNKNFFDLL
ASFRQIHGDSVQNQLVIQRVEIPVYLTLYSPAIHWILQCVAYRAPDLLLTEMMERCKKLG
NNALLLNSIMWAFRPEFVAARATDFIGMIKECDEAGFPKHLLFGSLGRSLACADPXSERL
PILNEAWKVITKVRSPQDYINCAEIWVEFTCRHFTKREVNTVLADIIKHMTPDRAFEDAY
PQLQSVIKKILTYFHNFSILFSMEKFLPFLDMFQKDSVRVEVCKSIMDVFIKHQQEPTRD
PVILNALLHVCKTMHDSVNALTVDDEKRALALLINGFIRMVSFGRDFEQQLSFCVEARAT
FCNLEPVLIQLIHTVNQLSMETRRVMGGNHSRKTAAFVRACAAYSFITIPSLSNIFNRLH
LYLLSGQVALANQCLSQADSFLKAAVSVLPEVPRGISVEGKLRSSEPFLLDFINNFLSTL
LVVPDHPEQGVLYLVRGLLNMVQDYTWEDNSDAKVRVYISALQLLAAMSQESYLYTIPKV
NSNETLYGGDPKFVTEINRVCETLIRQVLDYLKTLNQEELPGARRQGNLAFSLFTCLLAH
GDLRNNKLNQLAVNLWNLSHKNGCCDTRTSVRTLDHIKQQAQRPDMSHLSDMLLRLSLQS
RT
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgtgcagtggcattcccgcacgcgcaactacggcgcggagtcgcggagctgc
cgagcgacggccgtcacggtgcagagcggcgattaccatccgctcaaacccatcacggtg
acggattccaaatcctgccgcagcgcacggaaaggcagcacgtcttcatcgtcatcttcg
tccggctccgtcattcctgacccgctgagctccatgctggaaggcacggaccctctgtcc
ctcttcgccgccgccggcgaaaccccggcgctgtctcacagcagctcctccgtggaactg
gcgaggacacgtggggacaaagaagaagaagtgggctgtgattttgagccgtggtctgct
aaacggggcgagatcctagccaggttcaccacgaccgagaagctctctataaatctcttc
atgggatcggagaaaagcaaagccaccagccccagctctgcagtctcagagaaagtgcgc
actcgtctggaggagctggacgacctggaggaagtgaaggagctgttaaacctctctcag
caggattacgcaaaccgcatcgaggaactcaatcagtccctgaaggaagcctgggcttca
gaccagaaggtcaaagctctcaaaatcgtcattcagtgctccaagctgctttccgacacg
tcagtgatcctgttctaccccagcaagttcgtcctcatcaccaacattctcgacactttc
ggtcgtctagtctatgaaagaatctggtccatgtgctctgatcctgcccctcttccagac
tcgttctcagtggacgatgtgaacgacacggccaaggagacgtgcctcaactggttcttc
aagattgcctccatccgagaactcatccctcgcctatacgtggaggcggccattctgaag
tgcaaccgcttcgtgagcaaatcagggattcaggagacgttgccccggctcacggctatg
atccgagggatcggagacccgctagtgggcgtgtacgctcgtgcctacctgtgtcgggtg
ggcatggaggtggcgccacacctgaaggacagcctgaacaagaacttcttcgacctcctg
gcgtcgttccgccaaatccacggagacagcgttcagaaccagctggtgatccagagggtg
gagatccccgtctacctcacgctgtattctcctgccatccactggatcctgcagtgtgtg
gcctacagagcacctgacttgttgctgacggaaatgatggaaagatgcaagaaactcggc
aacaacgctctcctgctcaactccatcatgtgggctttccggcccgagttcgtggccgcc
agagccaccgattttattggcatgatcaaggagtgtgacgaggcggggtttcccaagcac
ctgctgtttgggtctctgggccgcagcctggcatgcgccgacccgncgagcgagaggtta
cccatcctcaacgaggcctggaaggtcatcacgaaagtgcgcagtccacaggactacatc
aactgtgcagaaatctgggtggagtttacctgccgccacttcaccaaaagagaagtgaat
acggtcctggctgacatcatcaaacacatgacccctgaccgtgcatttgaggatgcttat
ccacagttgcagtcagtgataaagaagatcctcacctacttccacaacttctccatcctc
ttctccatggagaagttcttacccttcctggacatgttccagaaggacagcgtgagggta
gaagtttgtaaatccatcatggacgttttcatcaaacatcagcaggagccgacccgtgac
cccgtgatcctcaacgctctgctccacgtctgtaagaccatgcacgactcagtcaatgct
ctcacggtggacgatgagaaacgagctctcgctctcctgatcaatggcttcattcggatg
gtgtcttttgggcgggactttgagcagcagttgagtttctgtgtggaagcccgagccacg
ttctgtaacttggagccggtcctgattcagctcattcacacggtgaaccagttgtccatg
gagacgagacgagtgatgggggggaatcactcacgcaagacggcggcgttcgtcagggcg
tgtgcagcgtacagcttcatcaccatcccgtctctcagcaacatcttcaaccgtctccat
ctttacctgctctcaggacaggtggctctcgccaatcagtgcctttctcaggcggattca
tttctgaaggccgcggtcagtgttctacctgaggttccacgtgggatcagtgtggagggg
aagctgcgttcctctgaaccttttctcctcgacttcatcaacaacttcctctccacactg
ctggtggtgccggaccaccctgagcagggtgtgttgtacctggtgagaggtttgttgaac
atggtgcaggattacacgtgggaggacaacagtgacgccaaagtgcgcgtgtacatcagc
gcgttacagctgctggccgccatgagccaggagagctacctgtacaccatacctaaagtg
aacagtaacgagacgctgtatggcggcgaccccaagttcgtaaccgagatcaatcgagtg
tgtgagacgctgatcagacaggtgctggattacctgaagactctgaaccaggaggagtta
ccgggagcgcgccggcagggaaatctcgcgttctctctcttcacgtgtttgttggctcac
ggagatctgcgcaacaacaaactcaaccaactcgccgttaatctgtggaacctgagccac
aagaacggctgctgtgatacacgcacctcggtgcgcactctggaccacatcaagcagcag
gcccagcgtcctgacatgtctcacctctccgacatgctcctccggctctcgctgcagtca
cgcacctga
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