Silurus meridionalis (southern catfish): 124388588
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Entry
124388588 CDS
T08004
Symbol
arid5b
Name
(RefSeq) AT-rich interactive domain-containing protein 5B
KO
K25857
AT-rich interactive domain-containing protein 5
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124388588 (arid5b)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Helix-turn-helix
ARID
124388588 (arid5b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
Cas_APE2256
Motif
Other DBs
NCBI-GeneID:
124388588
NCBI-ProteinID:
XP_046709323
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All DBs
Position
7:complement(7298610..7397143)
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AA seq
1181 aa
AA seq
DB search
MEPNSLTWVGSPCGLHGPYIFYKAFRFKSEAQTRILSLGDFFFARCKPEDPVCIAELQLL
WEERTTKQLLSSSKLYFLPEDTPQGRTVAHGEDEVIAVSEKVIVKLEDLVKWTVWDSSCW
NKGLQALPLKPSMLKELGKNGQRESLYRFRESTLNSGLNFKDVLREKAELGDDAEDKRVL
VLSYPQYCRYRSIIARIRERPASLLTDQVVLALGGIATLTSNTQILYCRDTFEHPTLLEN
DSICDEFAPNLKGRPRKKKVSICQRRDSPAQSGNTKEPASVEAKAPSKVKAETKAVVSKP
KSSSCKKVLAEEKSKEETGEECRAEEQAFLVALYKYMKERKTPIERIPYLGFKQINLWTM
FQAAQKLGGYELITARRQWKNVYDELGGNPGSTSAATCTRRHYERLILPYERYTKGEEDK
PLPPIKPRKQEASTQEGGTKAKVPSTKRHKDEQSPKGWNEKEASAKVPEPGTEDVKDKEL
LQEEVMVKQEAQQSQVSSQIDAEARTPTTEDVDIQLVLKEEEKKPLLKKSWDGGPHEAIK
HTSIPQDGMPLKSEDSEVFPITASMPLRHSHPLPNCYIQDQCQHGTTEYKAPPYTLGKTE
QAGVKDSQNHVGMVLPTLKQRPLHPLSVPGIPTERAELPTKEESFCHNPLLYPRCNPGIM
SPLAKKKMLSQVSGTGLGNNYPYGPPPPLVNKKASSSSTEETASEQPGTQIPPSIGEASA
VIKRPSVIQHAQSFKPRSSEDRRPASETSHREVCGEREIYPSEQAQRQTLHQPQLSPTGE
PYIVRTNLHSSVEKSSEVPRPGQAPNFHGDFCSSPHLHSLYRQTEHHLSKEQLSKYLNRE
AYPRDCETAHGFPQSQHPDSGSLTYSPHLNQKEKGTSCEKVPEEQPTDLSLPKPSLHKLP
HSTSSLCNLSHSMMQQDIKNTPLFQAGNSQSSSLDYHPRACRVPPMTVSTPKKVVEPQLK
AHSGRGEETVSYKIDELARPILSTKCSPQNVGAARPLKRNLEELENGATEKKIRAVTPMH
CSTPRDIPVKVRTPEPDNESMKPAEPAHAVHINSYAAEGHKFPMHSSIFPGLYPGAFVSQ
VQEMCDSLGPHAPPSYSHPLQYLKNQAVISPLMPQFAIHSIMMQRQFLAQAANPAHLYRH
PMGTSYGDILHHGLYPMTALNPQPAFSPPQLSSVHPSTKLS
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaactcactcacgtgggtcggctcaccttgtggcttgcacggaccctacatt
ttctacaaggcgtttcggttcaagtctgaagcccaaacccgaatattgtctctcggcgat
tttttcttcgcgcgctgtaaaccggaggacccggtgtgtatagccgagctgcagctgctt
tgggaagaaaggacaaccaagcaacttttatccagctccaaactttattttctgccagaa
gatactccccagggaaggacggtcgctcacggagaggacgaagtgatcgccgtgtcagag
aaggtcatagtgaagttggaagacttggtgaaatggacagtgtgggattcatcatgctgg
aacaagggcctgcaagcactgcctctaaagccctcaatgctcaaagagctgggcaagaac
ggccagagggaaagcctctaccgcttccgagagtccacgctcaacagtggcctcaacttc
aaggacgtcctaagagagaaggcagaactgggtgatgatgcagaggataagagggtcctg
gtgctaagctatccacagtactgtcgttaccgctccatcattgcacggatccgtgagcgg
cctgcttcactcctgacggaccaggtggtactagctctggggggtattgctacgctcaca
agcaacactcagattctctactgcagggacacattcgagcaccccacactgctggagaac
gacagcatctgcgacgaatttgcacccaatttaaagggccggccccggaagaagaaagtc
tccatatgccagcgcagagattcgccagcccagagtggaaacaccaaagagcctgccagt
gtagaggccaaggcacccagcaaggtgaaagcagaaacaaaggcagtggtgtccaaacct
aagagcagcagctgcaaaaaggtattggccgaagagaagagcaaggaggagacaggggag
gaatgtcgtgccgaagagcaggcctttctagtggctctctacaagtacatgaaagagagg
aagacccctattgagcgaataccctatctagggttcaaacagataaacctttggacgatg
tttcaagctgctcagaagctgggaggatacgagctgatcacagcccgccgacagtggaaa
aatgtatacgacgagctgggtggaaacccaggcagcaccagcgcagcgacgtgtacacgg
agacactacgagaggctaatcttgccctatgaaagatatacgaaaggagaggaggacaag
ccactaccccccatcaagccccgaaagcaagaagccagcacccaggaggggggcactaag
gcaaaggtgccatccacaaagcgccacaaagacgaacaaagtccaaagggctggaatgaa
aaggaagcctcggcgaaagtccccgagccgggtacagaggacgtaaaggacaaagagctg
cttcaggaagaggtgatggtgaagcaagaggcacagcagtcccaggtttcatcccagata
gatgccgaggcaagaactcccaccacagaggatgtagacatacagttggttcttaaggag
gaggagaagaaaccattgctcaagaaatcctgggacggtggtccacatgaagctatcaaa
cacacctcgattccacaggatggcatgccactcaagtctgaggattctgaggtgtttccc
atcactgcgtctatgccactacggcactcccacccccttcccaactgttacatacaggac
caatgtcagcatgggacaacagaatacaaggcacctccatacacccttggaaagacagaa
caggctggtgtaaaggacagccagaaccatgtgggaatggtattacccaccttgaagcaa
agacctctacaccctctatcagtaccagggatcccaacagagagggctgaactccccacc
aaggaggagagcttctgtcacaacccactcttgtatcctagatgcaaccctggcattatg
tctcccctagctaagaagaagatgctttcacaagttagtggtactggtttgggcaacaat
tacccttatggtccaccacccccattagttaacaaaaaggcatcgagcagtagtacagaa
gaaacagcttctgaacaacccggcactcagatccctccctctataggtgaggcaagtgca
gttatcaagcgtccatctgtcatccagcatgcacagagttttaaacctcgcagcagtgag
gacagaagacctgctagtgagacctcacatagagaggtgtgtggtgagagggagatatat
ccttctgaacaagcccagcgtcagactctacaccagccacagctcagtcctacaggagag
ccctacattgtgcgaaccaatcttcattccagtgtggagaaatccagcgaggtacctcgt
cccggccaggcaccaaatttccatggtgatttctgctcctccccgcacctgcacagcctc
taccgacagacagagcaccatctaagcaaggaacagctaagcaagtacctaaacagagag
gcttacccacgggactgtgaaactgcacatgggtttcctcagagtcagcatccagacagt
ggaagtctaacttactcaccccatctgaatcagaaagaaaaaggtacttcttgtgaaaag
gtgccagaggagcaaccgacagatttgagcctcccaaaaccctctttacataaattgccc
cactccacctcatctctgtgcaacctctcacattccatgatgcagcaggacattaaaaac
actcctctttttcaggcaggtaacagtcaaagctcaagcctggactatcaccccagagcc
tgccgtgttcctcctatgactgtgtctactccaaaaaaggtggttgaaccccagctcaaa
gcacacagtggtcgaggagaagagacagttagttacaagatagatgaactggctcggcct
attctaagcaccaaatgtagcccacaaaatgttggtgcagcacggccacttaaacggaat
ctagaggagttggagaatggagccacagaaaagaagatccgagctgtgacccccatgcac
tgctccacgcctagagatattccagtgaaagtgcggaccccagagcctgacaatgaatcc
atgaagccggctgagccggcacacgcggtgcacatcaacagctatgctgccgagggacac
aagttcccaatgcactcctcaatttttccaggactgtatcctggggcatttgtatctcag
gttcaggaaatgtgtgacagcctgggccctcatgctccccctagttattcacatccactg
cagtacttgaagaaccaggctgtcatttcaccactcatgccccagtttgctattcattcc
ataatgatgcagagacagttcttggcccaggcggccaatccagcccacctgtacaggcac
ccaatggggacttcatatggagacattctacatcatggcctttaccccatgacagccctc
aatcctcagccagctttcagtcccccacagctctcctcagttcatcctagtaccaaactc
tcttag
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