Silurus meridionalis (southern catfish): 124388599
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Entry
124388599 CDS
T08004
Symbol
arhgap23b
Name
(RefSeq) rho GTPase-activating protein 23 isoform X1
KO
K20315
Rho GTPase-activating protein 21/23
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124388599 (arhgap23b)
Membrane trafficking [BR:
smeo04131
]
Endosome - Golgi transport
Others
Others
124388599 (arhgap23b)
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
124388599 (arhgap23b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PDZ_6
PH
PH_9
PDZ
PDZ_2
PH_11
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
124388599
NCBI-ProteinID:
XP_046709354
LinkDB
All DBs
Position
7:9871841..9906352
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AA seq
1519 aa
AA seq
DB search
MRRLVSGVPAPAGKEWCFEFPVGVDCSDPEPRCIWLAALRNLNVHHSHVRFSRRNMLYWH
LHWAKGPRDGVLLSNENACPVSREGVAWKGPRTVVLQKTSQGFGFTLRHFIVYPPESALH
TSVKDVDNGNGKGNHRGRMEPMDTIFVKSVKESGPAHQAGLCTGDRLVKVNGESILGKTY
SQVIALIQNSKSLLELSIMPKDEDVLQLVSAYSHDAYLKGNQPYTGGAQNLPEPPPICYP
RSKPTSSVMPGNLNCRRGSAGLLDSRPMGDSIGGTGRRSDTPGRLCNQRARSSTLAISPL
DFHFANHNEAISSASLPHPRKGSLPLSQSELCHQALSKWYYSQTTERPGMSHHHRSISQD
TLLCHYGTATGVNQSPYIDSCWMGRWGMTGAQQSNRSCSENLLATCAEYEKSHGHSQEKL
DKAASLVSRCYEKSTCASQSSQSVWKEEQPCLANQRAVTCADVLPLDRGSSHAQESAQSR
CLPTQTVDDQMVGYRSYSPSFCRKAGHLMQQAHSFRDSSYTGPHLSWTTTPKTSPPDSAP
STGRDSSPLSMSSTAETQSSAKESSGSGPTLEESVQAQMQEVVLRQKLPGGKCTPLGMRH
PNYAVPVDLLEPPVALAPGRSNGNLQPLPVEQDSLASIPFIDEPTSPSVDLLAQHVPASS
VVSSSLCQAPTLSSSPVPPSLTSPLTHLLDTDCSTVKNSRRSSYLLAITTERSKSCDEGL
NTFRDEGRMFMRLPKRVKSFFTEGSLESLRAAEEARSKRHSTSELGNITLTDIRKEGWLH
YKQILTEKGKKVGGGMRPWKRVFSVLRSHSLFLYKDKREAVLHGAGSLGHGGGGEDEQPI
SVRGCLIDIAYSETKRKNTLRLTTQDFCEYLLQAEDRDDMLSWIRIIRENSKTDNEELGF
SRQALINKKLNDYKKQSLTGTKPDTSPRVHRMMQPFLLSKTDSSSGVNRSPKAESKEENS
PPKATWSINIMKKGKKAGPKAFGVRLEDCPPGATNKFVPLIVETCCSLVEEMGLEYTGIY
RVPGNNAMVSTLQDQLNKGMEINTTEERWQDLNVISSLLKSFFRKLPEPLFTDDKYNDFI
YANRLEDAGDRLKTMRKLIRDLPDHCYHTLKFVISHLKRVADHSEKNKMEPRNLALVFGP
TLVRTSEDNMTDMVTHMPDRYKIVETLILHHAWFFTDELMDKDEKTPEDQRDEQPIPNID
HLLSNIGRTAPLGDASDSTNSDSAKSKGSTISKKDVSAKDFLPLSIISAVTRKRKKHRSA
CPTDSSSDEDSEHEPVKASNYGELSENGGNERDGGQQDEEDEESKMGCAAQSEESQTKEV
DEKDVEGKQMMEPQEEREQEVGGRESGSIQQEDDGIRVSVNMRAQLGQEQPQRPRSFLYS
HQSSTGQSVTDQSASSPTSPCSSDAHRLSQVNSASRKKLRGERARPRSLYEEPGLERAAG
LARVKASLVRGQERLRQAMSPSRDPSVQPSWLSQVHANFLSSANDLWRSGTQRRHASPET
RRRRRDWRRHTVVGNSGEI
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atgagacgcttagtgtcaggggttccagctccagctggtaaggaatggtgctttgagttc
ccggtgggggtggactgcagtgaccctgagcctcgctgtatatggctggcagctttgcgg
aacttaaatgttcatcacagtcatgtacggttcagcagaagaaacatgctgtactggcat
cttcattgggcaaaagggccaagagatggagttctgctgtccaatgaaaatgcgtgtcca
gtgtccagggaaggcgtggcatggaaaggccctcgtacggtggtcctgcagaagacctct
cagggctttgggtttacactgcggcacttcatagtttacccacccgaatctgccctccac
acctctgtgaaggatgtagataatggcaatggaaaagggaatcataggggccgcatggag
ccaatggatactattttcgtgaaaagtgtaaaggagtcaggtcctgcacatcaggctggg
ctctgcacaggagaccgactagtaaaagtaaatggggagagtattctgggaaaaacctac
tcgcaggttatagcactaattcaaaacagtaagagtttactggagctttccattatgcct
aaagatgaggatgtactccagttggtaagtgcatactctcatgacgcttatctgaaaggg
aatcaaccatacactggaggggctcaaaaccttccggagcctcctccaatttgctaccct
cgcagtaaacccacttcctccgttatgcccggcaacctaaactgcaggcgtgggtcagct
ggtctcttagacagccgcccaatgggagatagtatagggggtacaggccggcgttcagat
acccctggccgactttgtaaccagcgtgcccgctcttcaaccttagccatcagccctctg
gactttcactttgccaaccacaatgaggctatctcctcagcctccctgccccacccacgg
aagggcagccttccactgtcacagagtgagctttgtcaccaagcactatctaaatggtac
tacagccagacaaccgagcgcccaggcatgtcccaccaccatcgcagcatctctcaggac
acgctgctgtgccactatggaactgccacaggagtcaatcagtccccttacatcgactcc
tgttggatgggtaggtggggcatgactggggctcagcaatcaaaccgatcctgctccgaa
aatttacttgctacttgtgcggaatacgagaagagccatgggcactcgcaggagaaattg
gacaaggcagcctctctggtttcacgctgctatgaaaagtcaacctgtgcctcgcagagc
agccagtcagtctggaaagaagagcagccttgcttggccaatcaacgtgcagtaacttgt
gcagatgtgttacctctggatcggggatccagccatgcccaagagtcagcacagtcccga
tgtctgcccacgcagacagtagatgaccagatggtaggctaccgcagctatagtccctct
ttctgtcgcaaagcaggtcacctcatgcagcaggctcactcctttagagattcttcctac
actggtcctcaccttagctggactaccacacctaaaaccagccctccagatagcgcacct
tccacaggcagagattcatctcctctgtctatgtcttccactgctgagacacagagctct
gcaaaggaaagctcaggtagtggacccacactggaggagtctgttcaagcacagatgcaa
gaggtagtcctaagacaaaagcttcctggtggcaaatgtaccccccttggaatgcgccac
ccaaattatgctgtgcctgtggatctactcgaacctcctgttgccttggcccctgggcgg
tccaatggtaacctgcaacctctgcctgtggagcaggactccctggcttccattcccttt
atagatgagccaaccagccccagtgtagatctgcttgcccagcacgtgcctgcctcctct
gtggtgtccagcagcttgtgccaggcacctaccctgtccagcagccctgtccctccctcc
cttacctcccctctcacacatctcctcgacacagactgcagcactgtcaaaaacagccgt
cgctcttcctacctgctggccatcacaactgagcggtccaaatcttgtgatgaaggtctg
aacacattcagagatgaaggccgcatgtttatgagattaccaaaaagagtcaaaagcttt
tttacagagggttccctcgagagtctgcgagcggcagaggaagcccgctccaaacgccac
tccacctctgagcttggcaacatcacgctaacggatatcagaaaagagggctggctgcac
tacaaacagatccttacagagaagggcaagaaagttggtggtggtatgcggccatggaaa
cgggttttctctgtgctgcgctctcattcactctttctgtacaaagacaagcgtgaggca
gtgctccatggagctgggtcattaggccacggaggtggtggggaggatgagcagcccatc
agtgtccgtggctgcttgattgacatagcctacagtgagacgaagaggaaaaacacacta
cgacttaccacacaggacttctgtgagtacttgctacaggcagaggatcgggacgacatg
ttgagctggatccgcatcattcgtgagaacagcaagactgacaatgaggagcttggtttt
tccagacaggccctcatcaataagaaactaaacgattacaagaaacaaagcctaacgggt
actaagccagacacttctcccagagtccaccgaatgatgcaaccatttctcctctccaag
actgacagcagctcaggagtaaaccgatccccgaaagcagagagcaaagaggagaacagt
cctccgaaggctacatggagcatcaacataatgaaaaaagggaagaaagcagggcctaag
gcttttggggttagactagaggactgccctccgggagctactaataagtttgtgcctctg
attgtggagacctgctgcagcctggtggaagagatgggtttggaatacacagggatctac
agagtgccagggaacaatgccatggtgtccaccctacaggaccaactcaacaagggcatg
gagattaacactactgaagagaggtggcaggatctgaacgtaatcagcagcctccttaag
tcattctttaggaagcttccagaacctcttttcacggatgacaaatacaatgatttcatc
tatgccaatcgattagaggatgctggagaccggttaaagacaatgagaaaactgattcgt
gacttaccagatcattgctaccacacacttaagtttgtgatcagccatcttaagcgagta
gctgatcactcagagaagaataagatggagccaagaaacctcgctcttgtgtttggtccc
acgcttgtgcgtacctcagaggacaatatgacggacatggttactcacatgcctgaccgc
tataagattgtggagactcttattctccatcatgcatggttcttcactgatgagcttatg
gataaagatgagaagacccctgaagaccaacgggatgagcagcccattccaaatatcgac
catctcctctccaacattggccgaacagcaccactgggggacgcctcagattccactaac
agtgattcagctaaatccaagggatctacgatttcaaagaaagatgtaagcgccaaggat
ttccttcccctttccatcatatctgctgtgacccggaagagaaagaagcatcggagtgcc
tgccctacagacagcagtagcgatgaggactcagaacatgagccggtgaaagccagtaac
tatggcgaactgagtgagaatgggggtaatgagagggatggaggtcagcaagatgaggag
gatgaggagagcaagatggggtgtgcggcccaaagcgaggaaagtcagacaaaagaagta
gatgagaaggatgtagaaggaaaacagatgatggagccacaagaggaaagagaacaggag
gttggagggagggagagtggaagtatccagcaagaggatgatggtatacgagtgagcgtc
aacatgagggcacagttagggcaagagcaaccgcagcggccccgtagcttcctctactcc
caccagagttctacagggcagagtgtcacagaccagtcagccagctctcccacatccccg
tgctccagtgatgcccacagactcagccaggtcaactcagcaagccgcaagaagctgcgt
ggggagagggctcgtcctcgctcgttatatgaggaaccaggtctggagcgggctgcgggt
ctggcccgagtcaaagcctcacttgttcgtggccaggagaggctgcgtcaggccatgtcc
cccagcagagacccgtctgtccagccaagttggctaagtcaggtacatgccaacttcctt
tcctctgccaacgatttgtggaggtcagggactcagcggcgtcatgcttccccagagacg
cgccgcaggcggagagactggagacgccatacagtggtgggaaatagtggggaaatctaa
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integrated database retrieval system
