Silurus meridionalis (southern catfish): 124388653
Help
Entry
124388653 CDS
T08004
Symbol
si:ch211-141o9.10
Name
(RefSeq) probable endonuclease 4
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
124388653 (si:ch211-141o9.10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smeo03400
]
124388653 (si:ch211-141o9.10)
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
124388653 (si:ch211-141o9.10)
DNA repair and recombination proteins [BR:
smeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
124388653 (si:ch211-141o9.10)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AP_endonuc_2
Ntox15
Orthopox_C10L
Motif
Other DBs
NCBI-GeneID:
124388653
NCBI-ProteinID:
XP_046709502
LinkDB
All DBs
Position
7:11454760..11462448
Genome browser
AA seq
329 aa
AA seq
DB search
MESHKRGEKRRKARNPVKNEEIEELDERPGCSTEEVVRGKKGRTKAQKKYIGAHVSIAGG
IWKAVEASVDLGGHSFGLFLGSQRSWQRPALDQSAAVKFQQACSQHGFDPAHILPHGSYL
MNCGSPKEDIFDKSQDMLVDELSRCSVLGLTQFNFHPGATLGSSKEQCIERIAQAINHAH
QQIPAVCTVLENMSGQGSTVGGEFNELKSIIDHVRDKSRVGVCLDTCHAFAAGYDISSAG
GVKSVLDEFDQVVGLHFLRAVHLNDSKGKLGCHLDRHEDIGRGQIGIAAFRNIVNEPRLD
NIPLILETPGRPGFEYAEQIELLYSLCED
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggagtcacataaaagaggagagaagaggagaaaagctagaaatccagtaaaaaatgag
gaaattgaagaattagatgaacgaccaggatgcagtactgaagaagtggtgaggggaaag
aaaggaagaactaaagcacaaaaaaagtacattggtgctcatgtctctatagcaggaggt
atatggaaagcagttgaagcaagtgtagacttggggggtcacagtttcggattatttttg
ggttcccaacgttcatggcaaagaccggcccttgatcaatctgctgcagtgaaattccag
caggcgtgttctcaacacggctttgacccagcccacattctgccacatggatcttacctg
atgaactgtggctctcccaaggaagatatatttgataagagccaagacatgttggttgat
gaactcagtcgctgcagtgttttgggcctcactcagttcaacttccatcctggggccacc
ttgggctccagcaaagagcagtgcattgagaggatcgctcaagctataaaccatgctcac
cagcaaatacctgcagtctgtactgtacttgaaaatatgagtggacagggaagtactgtg
ggtggggagtttaatgagctgaagagcataattgaccatgttcgagataagtcacgtgtt
ggagtatgtctagacacgtgccatgcatttgcagcaggttatgacatttcttcagcagga
ggagtgaagtctgtgcttgatgaatttgaccaggtggttggattgcacttcctgagagca
gttcatctcaatgactcaaaaggtaaattgggatgccatttggatcgccatgaggacatc
ggccgtggacagattggcatcgctgcttttcgaaacattgtaaatgagcctcgactcgac
aacatccctctcattcttgagacacctggccgcccaggtttcgaatatgctgagcaaata
gaactcctgtattctttatgtgaggactag
DBGET
integrated database retrieval system
