Silurus meridionalis (southern catfish): 124388655
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Entry
124388655 CDS
T08004
Symbol
wdr45b
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 3 isoform X1
KO
K22991
WD repeat-containing protein 45
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124388655 (wdr45b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124388655 (wdr45b)
Membrane trafficking [BR:
smeo04131
]
Autophagy
Other autophagy associated proteins
Others
124388655 (wdr45b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_Vps41
ANAPC4_WD40
BCAS3_WD40
WD40
WD40_Prp19
Beta-prop_IFT122_2nd
Beta-prop_HPS5
EIF3I
WDR55
Beta-prop_WDR35_TULP_N
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_IFT140_2nd
Beta-prop_VPS8
Beta-prop_TEP1_2nd
Beta-prop_IFT122_1st
Beta-prop_DCAF12
DUF1513
DUF5711
Motif
Other DBs
NCBI-GeneID:
124388655
NCBI-ProteinID:
XP_046709507
LinkDB
All DBs
Position
7:5250186..5262265
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AA seq
350 aa
AA seq
DB search
MNLLPTNPHGNGLLYAGFNQDHGCFACGMENGFRVYNTDPLKEKEKQDMAGERKFLEGGV
GHVEMLFRCNYLALVGGGKKPKYPPNKVMIWDDLKKKTVIEIEFSTEVKAVKLRRDRIVV
VLDSMIKVFTFTHNPHQLHVFETCYNPKGLCVLCPNSNNSLLAFPGTHSGHVQIVDLANT
ERPPVDIPAHEGALCCIALNLQGTRIATASEKGTLIRIFDTSAGHLIQELRRGSQTANIY
CINFNQDASLICVSSDHGTVHIFAAEDPKRNKQSSLASASFLPKYFSSKWSFSKFQVQSG
SPCVCAFGTEPNAVIAICADGSYYKFLFNQKGECSRDVYAQFLEMTDEKI
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaatttattgccaaccaaccctcacggaaatggacttctgtatgctggattcaaccaa
gatcacggatgctttgcatgcgggatggaaaatggcttcagggtgtacaacacagatcct
ctcaaagaaaaagaaaaacaagacatggcgggggaacgaaagtttcttgagggtggagtc
gggcatgttgagatgctctttcgatgcaactaccttgcactcgttggaggaggcaagaaa
cccaagtatccacctaataaagtgatgatctgggatgacctgaagaaaaagaccgtgatt
gagattgagttttctacagaagtcaaggctgttaagctacgaagagacagaattgtggtg
gtgttggattcaatgatcaaagtcttcactttcacacataaccctcaccagctgcatgtg
tttgaaacatgctacaaccctaaaggtctgtgcgtcctgtgtccgaacagcaacaactct
ttgctcgcatttcccggcacccactctggacacgtgcagatagtagacttggccaacaca
gagaggcctccagtggacatccctgcccacgagggagctctatgttgcatcgcccttaac
ctccagggcactcggatagccacggcttcagaaaaagggactctgatcagaatattcgac
acctctgcgggtcacctgattcaggagttaagacgaggatcgcagactgccaacatatat
tgcattaacttcaaccaggatgcatctctcatctgtgtgtcgagtgatcatgggactgtc
cacatatttgctgcagaagatcccaaaaggaacaagcagtcaagcttggcctcagccagt
ttcctacctaagtatttcagctccaagtggagtttctcaaagttccaggtccaatctggc
tcaccctgcgtctgtgcctttggaaccgagcccaatgcagtcatagccatttgtgctgat
ggcagctattacaagttcctattcaaccaaaaaggggagtgttccagggatgtatatgcc
cagttcttggaaatgactgatgagaagatctga
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