KEGG   Silurus meridionalis (southern catfish): 124388676
Entry
124388676         CDS       T08004                                 
Symbol
chad
Name
(RefSeq) chondroadherin
  KO
K06248  chondroadherin
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo04510  Focal adhesion
smeo04512  ECM-receptor interaction
smeo04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    124388676 (chad)
   04518 Integrin signaling
    124388676 (chad)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    124388676 (chad)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:smeo00535]
    124388676 (chad)
Proteoglycans [BR:smeo00535]
 Extracellular matrix (ECM) proteoglycans
  Small leucine-rich proteoglycan (SLRP) family
   class IV
    124388676 (chad)
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_5 LRR_1 LRRNT LRR_14 LRR_9 LRR_NXF1-5 LRR_NXF2 A-2_8-polyST
Other DBs
NCBI-GeneID: 124388676
NCBI-ProteinID: XP_046709537
LinkDB
Position
7:complement(14898306..14906842)
AA seq 360 aa
MQVKKFQLVVFIQFLAILIMGTESQCPSPCHCHGDLQHVICDNVGLKKIPRITEATRLVN
LQRNNLGMLPTGGFSEMKGLVSLHLQHCRIREIANHAFKGLKKLIYLYLSNNEISTIKHG
AFEDLTELTYLYMDGNQISGLAKGIFSPMINLFILQLDNNKIQDLQAGTFTGAKDLRLLH
ISNNNLRSMQPGSLDEVENLATLTLDRNKLSTYPIEAMSKLRVMEELNLSKNPLTFIPDH
AFRSFGRYIEKLHLNDMGLEKFSNAAFEGVAVLKSLHIENNKLKILPSNLVLTNMQNLTM
FNNPWSCTCNLANLRRWMDSSQHRPEAICASPPNQKGKQIRDSPAFNKCKMKKDKKGARH
NT seq 1083 nt   +upstreamnt  +downstreamnt
atgcaagttaaaaaattccagttagtggtgtttatacaatttttggctatccttataatg
ggtacagaaagccaatgtcctagtccatgtcactgtcatggtgacctacagcatgttatc
tgtgacaacgtcggcctcaagaagattcctcgcatcactgaggctactcgcctagtcaat
ctgcagcgcaacaacctgggcatgcttccaaccgggggcttcagtgaaatgaaggggctc
gtctcactgcacttgcagcactgccggatccgtgagatagccaatcatgcattcaagggc
ctcaaaaagcttatttacctttacctttctaacaacgaaataagcaccattaaacatgga
gcctttgaggacctaactgagctcacctacctttacatggatggaaaccaaatctcaggt
cttgcaaaaggcatcttctcccccatgatcaatctatttatcctacagcttgataacaac
aagatccaggacctgcaagcaggtacctttacaggtgctaaagaccttcgcttgctgcat
atcagtaacaataatctaaggtcaatgcagcctggctctcttgatgaagtggagaacctg
gccactctcacactggatcgaaacaagctgtctacgtatcccatcgaggccatgagcaag
ctgcgtgttatggaggagcttaacttgtccaaaaaccccctcaccttcattcctgaccat
gcattcaggagttttggacgctatattgaaaaactgcatcttaatgatatgggcctggag
aagttttctaatgcagcttttgagggtgtggcagtgcttaagtctttgcatatcgagaac
aacaagttaaagatcctaccaagcaacttggttttgaccaacatgcagaatctcactatg
ttcaacaatccatggagctgcacctgcaatctagccaaccttagaagatggatggactcc
agtcaacatcgtcctgaggcaatttgtgcatcacctccaaatcaaaaagggaaacaaatc
cgagacagccctgcctttaacaagtgcaaaatgaagaaagacaaaaagggagcacgtcac
tga

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