Silurus meridionalis (southern catfish): 124388676
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Entry
124388676 CDS
T08004
Symbol
chad
Name
(RefSeq) chondroadherin
KO
K06248
chondroadherin
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04510
Focal adhesion
smeo04512
ECM-receptor interaction
smeo04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124388676 (chad)
04518 Integrin signaling
124388676 (chad)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124388676 (chad)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
smeo00535
]
124388676 (chad)
Proteoglycans [BR:
smeo00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
124388676 (chad)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRRNT
LRR_14
LRR_9
LRR_NXF1-5
LRR_NXF2
A-2_8-polyST
Motif
Other DBs
NCBI-GeneID:
124388676
NCBI-ProteinID:
XP_046709537
LinkDB
All DBs
Position
7:complement(14898306..14906842)
Genome browser
AA seq
360 aa
AA seq
DB search
MQVKKFQLVVFIQFLAILIMGTESQCPSPCHCHGDLQHVICDNVGLKKIPRITEATRLVN
LQRNNLGMLPTGGFSEMKGLVSLHLQHCRIREIANHAFKGLKKLIYLYLSNNEISTIKHG
AFEDLTELTYLYMDGNQISGLAKGIFSPMINLFILQLDNNKIQDLQAGTFTGAKDLRLLH
ISNNNLRSMQPGSLDEVENLATLTLDRNKLSTYPIEAMSKLRVMEELNLSKNPLTFIPDH
AFRSFGRYIEKLHLNDMGLEKFSNAAFEGVAVLKSLHIENNKLKILPSNLVLTNMQNLTM
FNNPWSCTCNLANLRRWMDSSQHRPEAICASPPNQKGKQIRDSPAFNKCKMKKDKKGARH
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttaaaaaattccagttagtggtgtttatacaatttttggctatccttataatg
ggtacagaaagccaatgtcctagtccatgtcactgtcatggtgacctacagcatgttatc
tgtgacaacgtcggcctcaagaagattcctcgcatcactgaggctactcgcctagtcaat
ctgcagcgcaacaacctgggcatgcttccaaccgggggcttcagtgaaatgaaggggctc
gtctcactgcacttgcagcactgccggatccgtgagatagccaatcatgcattcaagggc
ctcaaaaagcttatttacctttacctttctaacaacgaaataagcaccattaaacatgga
gcctttgaggacctaactgagctcacctacctttacatggatggaaaccaaatctcaggt
cttgcaaaaggcatcttctcccccatgatcaatctatttatcctacagcttgataacaac
aagatccaggacctgcaagcaggtacctttacaggtgctaaagaccttcgcttgctgcat
atcagtaacaataatctaaggtcaatgcagcctggctctcttgatgaagtggagaacctg
gccactctcacactggatcgaaacaagctgtctacgtatcccatcgaggccatgagcaag
ctgcgtgttatggaggagcttaacttgtccaaaaaccccctcaccttcattcctgaccat
gcattcaggagttttggacgctatattgaaaaactgcatcttaatgatatgggcctggag
aagttttctaatgcagcttttgagggtgtggcagtgcttaagtctttgcatatcgagaac
aacaagttaaagatcctaccaagcaacttggttttgaccaacatgcagaatctcactatg
ttcaacaatccatggagctgcacctgcaatctagccaaccttagaagatggatggactcc
agtcaacatcgtcctgaggcaatttgtgcatcacctccaaatcaaaaagggaaacaaatc
cgagacagccctgcctttaacaagtgcaaaatgaagaaagacaaaaagggagcacgtcac
tga
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