Silurus meridionalis (southern catfish): 124388681
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Entry
124388681 CDS
T08004
Symbol
sec24c
Name
(RefSeq) protein transport protein Sec24C isoform X1
KO
K14007
protein transport protein SEC24
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124388681 (sec24c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124388681 (sec24c)
Membrane trafficking [BR:
smeo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
124388681 (sec24c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
124388681
NCBI-ProteinID:
XP_046709553
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Position
7:complement(14829980..14846124)
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AA seq
1243 aa
AA seq
DB search
MNVNQEPHMASPYGQPQSGYQDYPQSGYGGQQMPGGYSAQYAPYNGPASNYQTGPPQGYS
PYASFPSKALAANLVSDLSSSSPLDLGMRGPPTSSAPQAPAAQPYSQFGQSDIQNGPPSM
GAPPQRPSVSQSFAQGAMPMAGPHPAYNQQFGAPPTSMQQLTNQMAGIQVGSTVPSSAGP
GYALPAISQAPVSAPPSSFAPMSPVPAQPPPTSGAPHPPAQSFYRAPPAQQPFPPSAQPY
HSAPGPTQLPPPPLTSQQTFSQTSPLSQPQFSSAPPTGPTASYGVPPPPVQTSHPRAPLP
TSQPAAFPGGPPPTSSSSQYSATMPPASQPSLFQAGLPPPTTVTGFPPQGPPRPPHSGMQ
GPPMASQLPPMSQANHVTSPHPGMLHGPAAPGMAPPQPGMQGYPPQQNGAFGQVRAPQPG
YGGQYSGQQGYGAPPPAQAPPPAAKRLDPDSIPSPQASDIPPVQKTRHRIDPDAIPSPIQ
VIEDDKASKSSEPFVTGVRGQAPPLVTTNFHVKDQGNASPRFIRCTAYNMPCTSDMAKQS
QVPLAAVIKPLATLPPDENPPYIVDHGESGPIRCNRCKAYMCPYMQFIEGGRRFQCSFCS
CVTEVPPHYFQHLDHTGKRVDCYDRPELSLGSYEFVATVDYCKNNKIPQPPAFIFLIDVS
YNAVKSGMVRIVCQELKTLLDHLPRENPDVESNVRVGFVTYNKVLHFYNVKASLAQPQMM
VVSDVADMFVPLLDGFLVNVSESRVVIESLLDQIPEMFADTRETETVFGPVIQAGLEALK
AADCAGKLFVFHTSLPIAEAPGKLKNREDKKLVGTDKEKTLFQPQVSFYANLAKDCVAQG
CCVDLFIFPNQYVDVATLGVVPTSTGGSIYKYTYFQAQADQERFLNDLRKDVQKQVGFDA
VMRVRTSTGIRATDFLGSFYMSNTTDVELACLDPDKTITVEFKHDDKLSEETGALIQCAV
LYTSCSGQRRLRVHNMAVNCCAQLAELYRNCETDTIINFFAKYAYRSVLNNPTKNVRDSL
VNQCAQILACYRKNCASPSSAGQLILPECMKLLPVYLNCVLKSDVLLPGADVSLDDRAYL
RQLVSAMDVADSHVFFYPRLLPVHKLDLESEALPVAVRDSEERLSKGGIYLLETGLNLFL
WVGVNTQQELLQNIFGNPAFSQIDPNMTSLPKLENPYSKKLRGIIESFRAQRSRFMKMVV
VKQEDKLELIFKHFLVEDKNNGGGASYVDFLCHMHKEIRTLLS
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtcaaccaggaacctcatatggcctctccttacggacagccgcaatctggctac
caggactacccgcagtctggttatgggggtcagcagatgcctgggggttattcggctcag
tatgcgccatacaacgggcctgcctctaattaccaaacaggtccacctcaaggatattct
ccttatgcaagctttccctctaaggctcttgcagcaaacttagtctctgacctgtcctct
tcctctcctcttgacttgggcatgagagggccccccacctccagtgcaccccaagcacct
gcagctcagccatattcacagtttggacaaagtgacatacagaatggaccaccatctatg
ggtgcacctccgcaaaggccttctgtttctcaatcattcgctcaaggtgcaatgcccatg
gcaggtcctcaccctgcatacaaccagcagtttggagcaccgcccactagtatgcagcag
ctgactaatcagatggcaggcattcaggttgggtctactgtaccctcctcagctggcccc
ggctatgctctacctgccatctcacaggctcctgtttcagctcctccatcttcttttgcc
cccatgtctcctgtccctgctcagcccccacccacctcaggtgcaccccacccaccagct
cagtccttttacagagctcctcctgctcaacaaccattcccaccttcagcccagccttac
cactctgcacctggtcccacccagctcccgcctccacctttgacttcacagcaaactttc
agtcaaacctctcccctttcacagcctcagttttcctcagctccaccaacaggccctact
gcatcttatggagttccacctccaccagtgcaaacctctcaccctagggcacctcttccc
acttcccagcctgcagctttcccaggagggcctcctcccacctcttcctcatctcagtac
tcagcaaccatgccccctgcatcacagccctccctattccaagcaggtcttcctccaccc
accactgttactggatttccaccccaaggacctcccaggcctccacactcaggcatgcag
ggtccccctatggcctctcagttgcctccaatgtcccaagcgaaccatgtgacttctcca
caccccggaatgttgcatggtcccgccgctcccggaatggcaccaccacagcctgggatg
cagggctatccacctcagcagaatggtgcgtttgggcaagtgagagctcctcagcctggt
tatggtggacaatattctgggcagcagggctatggagctccaccccctgcacaagcccct
cctcctgcagcaaagagactggacccagactccattcccagcccgcaagcctctgacata
ccgcctgtgcagaaaacaagacatagaatagacccagacgctattcccagcccaattcag
gtgattgaggatgacaaggcaagcaaaagcagtgagccttttgtcactggggtcagaggt
caagccccaccccttgtcactaccaactttcatgttaaagatcaaggaaatgcaagtcca
cgtttcatccgctgcacagcatataacatgccatgtacctctgacatggccaaacagtcc
caggtgccgctggctgctgtcatcaaaccgctggctactctgcccccagatgagaatcct
ccttatatagtagatcatggggaaagcggtcctattcgctgtaatcgctgtaaggcttac
atgtgtccctacatgcagttcatcgagggtggaaggcgcttccagtgtagcttctgcagc
tgcgtcactgaggtgcctccccattatttccagcatctggaccacacagggaagcgtgtc
gactgctacgatcgacccgagctgtctctgggcagctatgagtttgtagccacagttgat
tattgtaagaacaacaagattcctcagccaccagcttttatcttcttaattgatgtgtca
tacaatgctgtgaaaagtggcatggtgaggattgtatgccaggagctcaagaccctgctg
gaccatttacccagggagaaccctgatgtggaatccaatgtacgagtaggctttgtaacc
tacaacaaagtgctgcacttctataatgtaaaggcatctctagcccaacctcagatgatg
gtggtttcagatgtggcagacatgtttgtccccttgttggatggattccttgtcaatgtc
tcagagtccagggttgtcattgagagtttgctggatcagatccctgagatgtttgctgac
acacgagagacggagacagtgtttggccctgttatccaagctggactggaagcgcttaag
gctgcagactgtgctgggaagctctttgtcttccacacatctttgcctattgctgaagca
ccaggcaagttgaagaacagggaagacaaaaaactggttggaacagacaaggaaaagacc
ttattccagccccaagtgagcttctatgctaatctggcaaaggactgtgtggcacagggc
tgctgtgtggatctcttcatttttcctaatcagtatgtagatgtggcaacattaggggta
gtgcccacttcaacaggaggttccatctacaaatacacctatttccaggctcaggctgac
caggagaggtttctgaatgatctgaggaaagatgtgcagaagcaggtgggatttgatgca
gtgatgagggtccgcacaagcactggtatccgggccacagactttttaggttcattctac
atgagcaacaccacagatgtagagctggcatgtctagaccctgacaagactatcacagtg
gagttcaaacatgatgataagctcagtgaggagactggtgcacttatccagtgtgctgtg
ctgtacaccagctgtagtggtcagaggcgactccgggtccacaacatggcagtgaactgc
tgtgcacagctggctgaattgtacaggaactgtgaaacagacaccatcatcaactttttt
gctaagtatgcctaccgcagtgttctgaacaaccctaccaagaacgtgcgagacagtctg
gtgaaccagtgtgcacaaatcctggcctgttatcgaaagaattgtgcgagtccatcttca
gctggacagctgatcctcccagagtgtatgaagctgcttccagtgtatctcaactgtgta
ctgaagagtgatgttctgctccctggagctgacgtctccctagatgatcgcgcctatctg
agacagctggtcagcgccatggatgtggcagatagccatgtgttcttttatccacgactg
cttccagtgcacaaattggatttggagagtgaagctctgcctgtggcagtcagagactca
gaagagaggctctctaaaggaggtatttacctgctcgagactggcctgaaccttttcctt
tgggttggggtcaacacccagcaggagcttcttcagaacatctttggcaaccctgctttc
agccagatcgatcctaacatgacgtctttgccgaagttggaaaacccatactcaaaaaag
ctgagggggattattgagtctttccgcgcacagcgctctcgcttcatgaagatggtggta
gtgaagcaggaggacaaacttgagctcatctttaagcatttccttgtagaggacaaaaac
aacggcggtggggcttcttatgtggatttcttatgccacatgcacaaggagatccgcacc
ctcttgagctag
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