Silurus meridionalis (southern catfish): 124388773
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Entry
124388773 CDS
T08004
Symbol
psmd11b
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 11B
KO
K03036
26S proteasome regulatory subunit N6
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
124388773 (psmd11b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
smeo03051
]
124388773 (psmd11b)
Proteasome [BR:
smeo03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
124388773 (psmd11b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN6_N
PCI
RPN6_C_helix
TPR_12
TPR_3
Motif
Other DBs
NCBI-GeneID:
124388773
NCBI-ProteinID:
XP_046709747
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All DBs
Position
7:complement(12480798..12486977)
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AA seq
422 aa
AA seq
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MAAAAVVEFQRAQSLLSTDRNASIDILHSIVRRDVQQDDEEAVRVKEQSILELGTLLAKT
GQAAELGGLLKFVRPFLISISKAKAARLVRSLLDLFLDMEAATGQEVELCLECIEWAKAE
KRTFLRQALEARLISLYFDTKRYQEALQLGSQLLQELKKMDDKALLVEVQLLESKTYHAL
SNLPKARAALTSARTTANAIYCPPKLQAALDMQSGIIHAAEEKDWKTAYSYFFEAFEGYD
SIDSPRAITALKYMLLCKIMLNLPEEVQALISGKLALRYAGRQTDALKCVAQASKNRSLA
DFEKALTEYTKELRDDPIINTHLAKLYDNLLEQNLIRVIEPFSRVQITHISDLIKLSKGD
VERKLSQMILDKKFHGILDQGEGVLIIFEEPPVDKTYEAALETIQNMSKVVDSLYNKAKK
LT
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgcggcagtggttgagtttcagagagctcagtctctccttagtacggatcgg
aacgcttctatcgacattttacattctatagtcaggcgagatgttcagcaggatgatgaa
gaggcggtgcgtgtcaaagaacagagcatcctggagctcggcactctcctggccaagaca
ggacaagctgcagagcttggagggctcctgaagtttgtcagacctttcctaatctctata
agcaaggcaaaggcggcaaggctggtgcgctcgctgttggatcttttcctggatatggag
gcagccacaggacaggaggtggagctgtgtcttgagtgcattgagtgggccaaagctgag
aagaggacattcctccgacaggctcttgaggctcgtttgatctcactttattttgacact
aagaggtaccaggaggctttgcagctgggttcccagttactccaagagctgaagaagatg
gatgacaaagctttacttgtggaagtccagttgcttgagagtaaaacctatcatgcactc
agtaacctgcccaaggccagagctgctcttacctctgccaggaccacagccaatgccatc
tactgtccacccaaactccaggcagctttggacatgcagtcaggcattatccatgctgct
gaagagaaggattggaagacagcatattcttacttcttcgaggcttttgaaggctatgat
tccatcgatagccccagggccattactgcgctgaaatacatgcttctctgcaaaatcatg
cttaatttgccggaggaggtccaagccctgatcagtggcaaactggccttgcgttatgct
gggagacaaacagatgcgctaaagtgtgtagcgcaagccagcaagaacagatcattagca
gactttgaaaaggctctgactgagtacacaaaagagctgagagatgatcccatcattaac
acacacctggccaaactttatgacaacctgctggagcagaaccttatccgggtcattgag
cccttctccagagtacagataacacacatatcggatctcatcaaactctcaaagggtgat
gttgagagaaagctgtcgcaaatgatcttggacaagaaatttcatggcattcttgaccaa
ggtgagggagtcctgatcatatttgaggagccacctgttgataaaacctatgaggcagct
ctcgaaaccatccagaacatgagcaaagttgtggactcgctttacaacaaagctaagaag
ttgacatag
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