Silurus meridionalis (southern catfish): 124388842
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Entry
124388842 CDS
T08004
Symbol
twnk
Name
(RefSeq) twinkle protein, mitochondrial
KO
K17680
twinkle protein [EC:
5.6.2.3
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
smeo03029
]
124388842 (twnk)
Enzymes [BR:
smeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
124388842 (twnk)
Mitochondrial biogenesis [BR:
smeo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
124388842 (twnk)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
DnaB_C
ATPase
AAA_22
AAA_19
AAA_16
AAA_29
T2SSE
nSTAND3
TsaE
ABC_tran
cobW
Motif
Other DBs
NCBI-GeneID:
124388842
NCBI-ProteinID:
XP_046709861
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Position
7:complement(14096265..14099862)
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AA seq
733 aa
AA seq
DB search
MWARHLLRRTACLLGLPRGLHHRPVLRYITVAPVNSSLLQDPGQRSSWCRLHAGSKPTAL
FSPCRTLKRDAKSSIDVPVHPITVTDIKQYLRSKGISFHDGYSCLHASSIFVEPKSQSQE
GAGKDSYTMFIDKMTGQFLCKETLVEGSWEDLQDCLEVIQKEGQASINPEVLLSYSESVE
EQGQREMELKEVHRIWSSSVAFSDLFDEELQLIKTMFQITKLNNTTLKKFGVRFFKPTKS
LVFPWFSGRDLSLRGIKLLSAATKDNGQVMYTEASIPKLSNYYNLFGLPLVGRKETEMVL
TGSEIDSMAVSQATGLPALALPRGVSCLPPVLLPYLEQFRKITLWLGGDMRAWEASKIFS
KKLGLKRCSLVRPGDFHPCPNSALVQGRNLARIVKASIPAAHKSIVSFKQLRDDVFGELA
NVEQVAGIKWARFPELNRILKGHRTGELTVFTGPTGSGKTTFISEYALDLCMQGVNTLWG
SFEIKNVRLAKIILTQFAMQRLEENLEQYDYWADKFEELPLYFMTFHGQQNLKTVLDTMQ
HAVYLYDISHVIIDNLQFMMGQENLSVDKFAVQDNIIAAFRKFATNSSCHVTIIIHPRKE
EDDKDLQTASIFGTAKASQEADNVLILQEKKLVTCPGRRSLQVAKNRFDGDVGIFPLEFN
KSSLTFSAPVKSKQKLRKVKGDKTENSETEVKERNEKDAKPAKEPKTPKVLKEPLTRKIE
TTQEGRRNSKEDG
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcaaggcacttactgaggaggacagcctgcctcttagggctgcctcgtggactt
caccatcgtccggtcctgagatacatcaccgttgccccggtgaacagctctctgttgcag
gatcctggtcagagatcttcttggtgtcgcctccatgcaggatccaaacctacagcgctg
ttcagtccctgcagaacattaaaaagagatgcgaagtcttcaatagacgttcctgtccac
cccattacagtgacggacattaagcagtacctgcggtctaagggaatttcctttcacgat
ggttatagctgtttacatgcaagcagtatttttgtagagccaaaatcacaatcacaggaa
ggagctgggaaagacagctatacaatgtttattgacaaaatgactggacagtttctctgt
aaagagactctagtagaaggaagctgggaagacctgcaggactgtctagaggtgattcaa
aaagagggacaagcttcaattaacccggaggttttgttgagctactccgagagcgtggag
gaacaggggcagagggagatggaactgaaggaggttcacaggatttggagcagctccgtg
gcattctcagatctcttcgatgaggaattgcagctcatcaaaactatgttccagatcact
aagcttaacaacacaactctgaagaagtttggagtgagattctttaagccgactaaaagt
cttgtttttccctggtttagtggaagagacttgagcctgcgtggcataaaactgttatct
gctgctactaaagataatggccaagtgatgtatacagaagctagtattcctaaattatcc
aattactacaacctttttggccttccattggtaggacggaaggaaacagagatggtcctc
acgggaagtgagatcgacagtatggcagtgagtcaggccactggcctgcctgctttggcc
ctgccacgtggagtcagttgtctgccaccggtacttcttccttaccttgaacaattcagg
aagatcacactgtggttgggtggggatatgcgggcttgggaggcttcaaagatcttctca
aagaaactaggattgaagcgctgttctcttgtgcggccaggcgactttcatccatgtcct
aattcggctctggtgcaaggcaggaaccttgcacgtatagttaaggcttccattcctgct
gcccacaagtctattgtgtccttcaagcagctcagggacgatgtttttggagagctagct
aacgttgagcaggtggcaggtataaaatgggcccggtttcctgagctcaatcgaatctta
aaaggccatcggacaggcgagctaacagtgttcacaggtcccactggcagtgggaagacc
accttcatcagtgaatacgctcttgatttgtgtatgcaaggtgtgaacacattgtggggc
agctttgagattaagaacgtacgtttggcaaaaatcatcctgacccagttcgctatgcag
agactggaggaaaacttggagcagtacgactactgggctgataagtttgaggaacttcca
ctttactttatgaccttccatggacaacagaatcttaaaacagtgctcgacaccatgcag
catgctgtttacctctacgacatcagtcatgtgatcatcgacaacttacagtttatgatg
gggcaggagaacctgtctgtggacaagtttgcagtgcaggacaacattattgcagctttc
agaaagtttgcaacaaacagtagctgtcatgtgaccataattattcatcctagaaaagag
gaagatgacaaagatcttcagacagcatccatttttggcacagctaaggccagtcaggag
gctgataacgtgcttatccttcaggagaaaaagcttgttacctgtcctggacgcagatcc
ctacaggtggccaagaatcgcttcgatggggatgtggggattttccctctggagttcaac
aagtcttcacttaccttctctgccccagtcaagagcaagcagaaactgcgtaaggtcaaa
ggagacaagactgaaaactcagagactgaggtcaaggagagaaatgagaaagacgcaaag
cctgcaaaagagcctaaaactccaaaggtgctgaaagagccattaaccagaaagattgaa
actacacaagaaggaagacgcaatagtaaagaggatggttaa
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