Silurus meridionalis (southern catfish): 124388911
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Entry
124388911 CDS
T08004
Symbol
rab40b
Name
(RefSeq) ras-related protein Rab-40B
KO
K07928
Ras-related protein Rab-40
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124388911 (rab40b)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
smeo04031
]
124388911 (rab40b)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
124388911 (rab40b)
GTP-binding proteins [BR:
smeo04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
124388911 (rab40b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
124388911
NCBI-ProteinID:
XP_046709987
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Position
7:complement(14984859..14995064)
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AA seq
278 aa
AA seq
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MSHRSSPAKAYDFLLKFLLVGDSDVGKGEILASLQDGATESPYGYNMGIDCKTTTILLDG
RRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDITNRWSFDGIDRWIKEIDEHAPGVP
KILVGNRLHLAYKRQVTTENAQAFAERLGVTFFEVSPLCNFNITESFTELARIVLMRHGM
ERLWRPNKVLSLQDLCCRSIVSCTPVHLVDKLPLPVALKSHLKSFSMANGLNARMMHGRS
YSVIASSGTKRNGTKKSKLIYPPLSPSQSCTRTTCKIS
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgagccacaggagcagcccagctaaagcgtacgatttcctgttgaaattcctgctagtg
ggagacagtgatgtgggcaagggcgagatattggccagtttgcaggacggggctacagaa
tctccttatggatataatatggggattgactgcaaaaccactaccatactgcttgatggg
cgtagagtcaagttacagctttgggacacctctggacaagggcgtttctgcaccatattc
cgctcgtactccagaggagcacagggtgttatccttgtatatgacattacaaatcgttgg
tcctttgacggaattgacagatggattaaagagattgatgagcatgcgccaggagttccg
aagattcttgtggggaaccgtctgcacttggcatacaaacgtcaggtgacgactgagaat
gcccaagcctttgctgagcgactgggtgtcacattttttgaagtcagccctctgtgtaac
ttcaacatcacagagtccttcacagagttggcacgcatagttcttatgcggcacggcatg
gagagactctggagacctaacaaagtgttgagtctgcaggatctgtgctgtcgatccatc
gtctcctgcactcctgtgcacctggtggacaaactccctcttcctgttgccttaaagagc
cacctgaagtccttctccatggccaacggcctcaacgcccgcatgatgcatgggcgctcc
tactccgtcatagccagcagcggcacaaagaggaacggaacgaagaaatccaaactcatc
tacccacccctgagcccatcacagagctgtacgaggaccacgtgcaagatatcgtag
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