Silurus meridionalis (southern catfish): 124388972
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Entry
124388972 CDS
T08004
Symbol
arhgap17a
Name
(RefSeq) rho GTPase-activating protein 17a isoform X1
KO
K20638
Rho GTPase-activating protein 17
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
124388972 (arhgap17a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124388972 (arhgap17a)
Membrane trafficking [BR:
smeo04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
124388972 (arhgap17a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR
RhoGAP
BAR_3
VMAP-M1
RapA_C
Motif
Other DBs
NCBI-GeneID:
124388972
NCBI-ProteinID:
XP_046710086
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Position
7:complement(11043826..11059956)
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AA seq
837 aa
AA seq
DB search
MKKQFNRMKQLANQTVGRAEKTEVLSDDLLQIERRMELVRAVSHNTHKRLVTCLQGQKKL
PLTALSQAMLDGGSQLGEESLIGKMMELCGEAENRLASELMQHEIQIEKDILDPLNQLAE
VDIPNILKQRRQLAKLVLDYDSARTRWLQATKSIISGTNTQALTAKADSLKEEMDEAMNK
MELCKDQLSADLYNFFSKEGEYACYYVTLLEAQADYHRKSLSVLESVLPTIKSQQDSWTE
KPAFGTGLDEHLKRSSREIALPIEACVMMLLETGMKEEGLFRITAGASKLKKLKAALDCS
TSQLEEFYSDPHAVAGALKSYLRELPEPLMTYELYDEWIQASNISDPDKRLQALWVTCDQ
LPKNNKANFRYLVKFLAKLAQESEINKMTPSNIAIVLGPNLLWQKTEGSLAEMAAATSVH
VVTIIEPIIQHADWFFPEDVEFNVSGMFSMPTPMTNHVNHLTICDYDSGTMERKRPNSML
GPDNDLAKRDSSANKLMDHNPRRGSTLTRKQHASPAFQPPLPPVEAVSIAGSQPVAELLV
QQPAPEGLGMEACQPSLALGMAALAAAQQLLAQQTEELSVKSSDAASTPQKNGFGTSQLS
VASPTTGSGHSPLMARRAIKKPAPAPPKPTNPHSVQPGNQSTPQSSCGTPQSLSPSPRPL
STHSPSSLSPTQLGIQSSTIPRRYSSNQPPLQAPSHPPPEPPSHVTPPPQPTAVGEPVEE
TSPPSTPSPPKTPPPSVVPIENASTNVSYPFQSGSLPRPRPVPKPRNRPTVPPPPQPQSV
SSDPSETNDLWSAAYKMMDPGMSFKGLGQVLVPDIAPDQQPVTQLKDSDLDSESTVL
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagcagtttaatcggatgaaacaactcgccaaccagacagttggcagagctgaa
aaaacagaggtcctcagcgatgacctgttacagatcgaacgtcgcatggaactggtgcgg
gctgtttcccacaacacacacaagagactagttacatgtctgcaggggcagaaaaagctc
ccactgacagcattgtcgcaggccatgctagatggtgggagccaactaggagaggagtct
cttattgggaaaatgatggagttgtgtggtgaggcggagaacagactggcgtctgagttg
atgcagcatgagattcagattgagaaggacattctagacccactgaatcagttagctgag
gtggacatccccaacatactcaaacagagaaggcagcttgccaagctggtgctagactac
gattctgcacgaacaagatggttgcaggcaaccaaatccataatctccggaacaaacaca
caagcactgacagccaaggcagactcacttaaggaagagatggatgaagcaatgaacaaa
atggagctctgcaaggatcaactttctgctgacctgtacaattttttctcaaaagagggg
gaatatgcttgctactatgtaactttattagaggctcaagcggattaccacagaaaatct
ctctccgtgctggaaagtgtcttgccaactattaagtcacagcaagactcatggacagag
aagccagcatttggaacaggcttagatgagcacctgaagcggagtagcagagagatagcg
ctgcccatagaggcctgtgttatgatgctgctggaaacgggcatgaaggaagagggtctt
ttccggataactgcaggagcctccaaactgaagaagcttaaggcagcgctggattgctcc
acatctcaactggaggagttctactctgatccacatgcagttgctggggctttaaagtct
tacctaagggaactgccagaacctcttatgacttatgaactctatgatgaatggattcag
gcatccaatatttctgacccggacaaaaggttacaagctttatgggtgacctgtgatcag
ttaccaaagaacaataaagctaactttagatatctggtgaagttccttgccaagcttgct
caggaaagtgaaattaacaagatgacccccagcaacatagcaattgtcttgggaccaaat
ctgttatggcaaaaaacagaagggagtctagcagagatggcagctgcaacctctgtccat
gtcgttactattatcgagcccatcattcaacatgcagactggtttttccctgaagatgtg
gagttcaatgtatcaggcatgttttcgatgccaacaccaatgacgaatcatgtcaaccat
ctgaccatatgtgactatgactcgggcacaatggagaggaaaagacccaatagtatgttg
ggacctgataatgacttggctaaacgagacagctctgctaacaaattaatggatcacaat
ccccgtagaggcagtacactaactagaaagcagcacgcttcccctgccttccagccccct
ctgcccccggtggaggctgtcagtattgcaggaagccagccagtagctgagctcctggta
cagcagcctgcaccagagggcctgggtatggaggcctgccagcctagcttggcactggga
atggcagccctagcagcagcacagcagcttctagcacagcaaactgaggagctcagtgta
aagtcaagtgatgcagcatccacacctcagaaaaatggttttggaacttcacaactgagt
gtggcatctccaacaacaggatcaggacacagccctctcatggcacgcagagctattaaa
aagcctgctcctgctcctcctaaaccaaccaatccacattcagttcagccaggcaaccag
tcaactccacagtcttcatgtgggactcctcaatcgctctctccctctccgagaccactc
tccactcactcaccaagcagtcttagccctactcaattaggaattcagtctagcacaata
cctcggcgctattcaagcaaccagcctcccctacaggcccccagccacccccctccagag
ccacccagccatgtcactcctcctccacagcctacagcagttggagagccagtagaggaa
acatctccgcccagtactcccagtcctcctaaaactcctccaccttcagtggtccccatt
gaaaatgcaagcacaaatgtttcctacccgtttcagtccggttctctgcctcggcctcgg
ccagtgcctaaaccgcgcaacagacccactgttccacctccaccacagcctcagagtgtg
tcaagtgacccaagtgaaactaatgacctctggagtgcagcctacaaaatgatggatcca
gggatgtcattcaaagggctgggtcaagtccttgttcctgacattgcaccagatcagcag
cctgtcacacaactaaaggactcggacttggactcagagagcaccgtcctgtaa
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