Silurus meridionalis (southern catfish): 124389023
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Entry
124389023 CDS
T08004
Symbol
gdf10b
Name
(RefSeq) LOW QUALITY PROTEIN: growth/differentiation factor 10b
KO
K22674
growth differentiation factor 10
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
124389023 (gdf10b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
smeo04052
]
124389023 (gdf10b)
Cytokines and neuropeptides [BR:
smeo04052
]
Cytokines
Transforming growth factors (RSTK binding)
124389023 (gdf10b)
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
124389023
NCBI-ProteinID:
XP_046710179
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Position
7:4302587..4308785
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AA seq
420 aa
AA seq
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MRFKFLHALHVVLLLDLVEVKQSDSVTPEQDAPRDMRSVHMFKLYHQFNKERHSHRDQNT
VRSFQAVQVSFNTSVIFHFNLTSMPESEVILSASLHFLKQHNRPLSCRRSRGSSCHKXNT
FDPFKAGFRGLSQNTTFPAFLGNVTLSPHKKGHWQMSDVSSVVQWARARNELLLLVELDS
GEKPQDRIPPSILPYILVFANDLAINEPNSIAMSLQRYSPVGKERANRPPSVTPSSRIRR
EAEHLQNFLPNLQYDDQKNKQLWYNTYFALKPKTSSKSHSARQGPEVRTGGSVTRELSFD
KRTMKKARRKQWSEPRACARRYLRVDFADIGWSEWILAPKAFDAYYCAGTCGFPMPKVVR
PSNHATIQSIVRAVGIVPGVPEPCCIPEKMSELAVLFLDASRNMVLKLYPNMSVETCACR
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcggttcaagttcctgcacgcgctgcacgtggttttgctgttggacctggtggaagtg
aagcagagcgactcggtaacaccggagcaggacgcgccgagagacatgaggagtgtccac
atgttcaaactgtaccatcaattcaataaggagcgacactcgcaccgggaccagaacacg
gtcaggagcttccaagcagtgcaggtgtccttcaacaccagtgtcatctttcactttaat
ctgacttccatgcctgagtcagaggtgatcctctcagcaagcctacatttcctcaagcag
cacaaccggcccttgagctgccgacgttccagaggctcctcgtgtcacaagnncaacacc
tttgacccctttaaagctggttttcgagggctgtctcaaaacacaaccttcccagccttt
ttgggtaacgtcacattgtctcctcataaaaaaggacactggcagatgtctgacgtgtcc
tcggttgtccaatgggctcgtgctcgaaatgagcttttacttttggtggaacttgactct
ggagagaagccacaggatcgcatcccaccttccatcttgccttatattcttgtttttgct
aacgacctggccataaatgaaccgaacagcatcgctatgagcttacagagatacagccct
gtgggaaaagagagagcaaacagaccaccctcggtcactccgagctccaggatcagacga
gaagcagagcacttacagaatttccttcccaacctccagtatgacgatcagaaaaacaag
caactatggtacaacacttactttgctttaaaacccaaaacctcgtccaagagtcactct
gcgagacaaggtcctgaagtccggacaggaggaagtgtgactcgggaactgagcttcgat
aaaaggaccatgaaaaaggctcggcgtaagcagtggagtgaaccacgggcatgcgcaagg
cgttacctgagagtggatttcgccgatatcggctggagcgagtggattctggctcccaaa
gcgtttgatgcgtactactgtgctggaacctgtggattccccatgcccaaggtggtccgt
ccttcgaaccacgccactatccaaagcatcgtgagggcagtcgggatcgttcccggcgtc
cccgagccttgctgcattcctgagaaaatgagtgaactcgctgtgctgtttcttgatgcc
agcaggaacatggtgctcaagctttaccctaacatgtctgtggagacctgcgcgtgtcga
taa
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